RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 REEP5Q00765 189 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 LAPTM5Q13571 262 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 NAA30Q147X3 362 aaPredicted RBP14.31□□□□□ -0.12
RNF4-210ENST00000508235 PCBP2Q15366 365 aaKnown RBP eCLIP14.31□□□□□ -0.123e-7■■□□□ 14.5
RNF4-210ENST00000508235 NKAIN1Q4KMZ8 207 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 PAGE2BQ5JRK9 111 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 ZNF385CQ66K41 422 aaPredicted RBP14.31□□□□□ -0.12
RNF4-210ENST00000508235 SLCO4C1Q6ZQN7 724 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 ASPGQ86U10 573 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 PLD3Q8IV08 490 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 TRPV3Q8NET8 790 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 TTLQ8NG68 377 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 SNRNP27Q8WVK2 155 aaKnown RBP14.31□□□□□ -0.12
RNF4-210ENST00000508235 ESAMQ96AP7 390 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 PTCD3Q96EY7 689 aaKnown RBP14.31□□□□□ -0.12
RNF4-210ENST00000508235 SEC16BQ96JE7 1060 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 EFCAB11Q9BUY7 163 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 CHST8Q9H2A9 424 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 CPNE5Q9HCH3 593 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 ZNF358Q9NW07 568 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 IFT80Q9P2H3 777 aaPredicted RBP14.31□□□□□ -0.12
RNF4-210ENST00000508235 ZFP69BQ9UJL9 534 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 RUVBL1Q9Y265 456 aaKnown RBP14.31□□□□□ -0.12
RNF4-210ENST00000508235 FRYQ5TBA9 3013 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 GOLGA8RI6L899 631 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 TERTO14746 1132 aaKnown RBP14.3□□□□□ -0.12
RNF4-210ENST00000508235 GLRA3O75311 464 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 ONECUT2O95948 504 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 SCTRP47872 440 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 CCT5P48643 541 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 AGTR2P50052 363 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 MEF2AQ02078 507 aaPredicted RBP14.3□□□□□ -0.12
RNF4-210ENST00000508235 IRF8Q02556 426 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 PCDH1Q08174 1060 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 PWP1Q13610 501 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 FAM53BQ14153 422 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 TBCCQ15814 346 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 HIST2H2ACQ16777 129 aaPredicted RBP14.3□□□□□ -0.12
RNF4-210ENST00000508235 COL28A1Q2UY09 1125 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 CRTC2Q53ET0 693 aaPredicted RBP14.3□□□□□ -0.12
RNF4-210ENST00000508235 FBXO48Q5FWF7 155 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 XKR6Q5GH73 641 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 C1orf189Q5VU69 101 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 HIST2H2AA3Q6FI13 130 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 NIPAL1Q6NVV3 410 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 FAM199XQ6PEV8 388 aaPredicted RBP14.3□□□□□ -0.12
RNF4-210ENST00000508235 C19orf48Q6RUI8 117 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 TMIGD1Q6UXZ0 262 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 GPR155Q7Z3F1 870 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 CROCCP2Q86T23 111 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 SYVN1Q86TM6 617 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 OR2W6PQ8NHA6 318 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 SLC13A3Q8WWT9 602 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 STARD8Q92502 1023 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 FKBP10Q96AY3 582 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 TM4SF19Q96DZ7 209 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 WDR34Q96EX3 536 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 TMEM109Q9BVC6 243 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 NT5DC2Q9H857 520 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 PLAAQ9Y263 795 aa14.3□□□□□ -0.12
RNF4-210ENST00000508235 FARSAQ9Y285 508 aaKnown RBP14.3□□□□□ -0.12
RNF4-210ENST00000508235 A0A1W2PPM1 405 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 CCDC151A5D8V7 595 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 URADA6NGE7 173 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 TK2O00142 265 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 LCMT2O60294 686 aaKnown RBP14.29□□□□□ -0.12
RNF4-210ENST00000508235 CREG1O75629 220 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 HPDP32754 393 aaPredicted RBP14.29□□□□□ -0.12
RNF4-210ENST00000508235 CASP2P42575 452 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 SKP1P63208 163 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 RGS1Q08116 209 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 SRSF6Q13247 344 aaKnown RBP14.29□□□□□ -0.12
RNF4-210ENST00000508235 NCF4Q15080 339 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 RBBP5Q15291 538 aaKnown RBP14.29□□□□□ -0.12
RNF4-210ENST00000508235 HKDC1Q2TB90 917 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 ARHGAP40Q5TG30 622 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 FAM198BQ6UWH4 519 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 VN1R4Q7Z5H5 301 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 TEX9Q8N6V9 391 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 PTGR2Q8N8N7 351 aaPredicted RBP14.29□□□□□ -0.12
RNF4-210ENST00000508235 UBE2E3Q969T4 207 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 PHF21BQ96EK2 531 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 DRC3Q9H069 523 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 ACTL8Q9H568 366 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 PRORYQ9H606 182 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 AKIRIN1Q9H9L7 192 aaPredicted RBP14.29□□□□□ -0.12
RNF4-210ENST00000508235 ZNF304Q9HCX3 659 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 GEMIN8Q9NWZ8 242 aaKnown RBP14.29□□□□□ -0.12
RNF4-210ENST00000508235 TMEM216Q9P0N5 145 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 COPG2Q9UBF2 871 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 IL17BQ9UHF5 180 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 LGALS13Q9UHV8 139 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 GRID1Q9ULK0 1009 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 FER1L5A0AVI2 2057 aa14.29□□□□□ -0.12
RNF4-210ENST00000508235 SEC16AO15027 2179 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 P2RX6O15547 441 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 NDUFS4O43181 175 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 UGDHO60701 494 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 ALBP02768 609 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 KRT4P19013 534 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms