RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CCR8P51685 355 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 GUCY2DQ02846 1103 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 ILF2Q12905 390 aaKnown RBP12.25□□□□□ -0.45
HDAC1-209ENST00000484305 FAM53BQ14153 422 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 USP10Q14694 798 aaKnown RBP12.25□□□□□ -0.45
HDAC1-209ENST00000484305 IGFBP7Q16270 282 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 RBBP7Q16576 425 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 NDUFA9Q16795 377 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 WHAMMP3Q1A5X7 153 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 NADK2Q4G0N4 442 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 CATSPEREQ5SY80 951 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 PRSS41Q7RTY9 318 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 THOC6Q86W42 341 aaKnown RBP12.25□□□□□ -0.45
HDAC1-209ENST00000484305 CTAGE3PQ8IX95 158 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 SHISA5Q8N114 240 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 KCT2Q8NC54 265 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 ABHD11Q8NFV4 315 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 OR11G2Q8NGC1 345 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 OR4K1Q8NGD4 311 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 OR9A4Q8NGU2 314 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 NEIL2Q969S2 332 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 THAP11Q96EK4 314 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 TSNARE1Q96NA8 513 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 GPR22Q99680 433 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 CRB3Q9BUF7 120 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 ATP13A2Q9NQ11 1180 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 ZDHHC18Q9NUE0 388 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 CTNNAL1Q9UBT7 734 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 C3orf18Q9UK00 162 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 G3BP2Q9UN86 482 aaKnown RBP12.25□□□□□ -0.45
HDAC1-209ENST00000484305 MAP4K5Q9Y4K4 846 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 OARD1Q9Y530 152 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 PCDHGB7Q9Y5F8 929 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 SCN2AQ99250 2005 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 MYO18BQ8IUG5 2567 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 PRPF4O43172 522 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDAC1-209ENST00000484305 CCDC166P0CW27 439 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 STMN1P16949 149 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 GRK3P35626 688 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 MLLT10P55197 1068 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 SOX8P57073 446 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 MAT1AQ00266 395 aaKnown RBP12.24□□□□□ -0.45
HDAC1-209ENST00000484305 CDKL1Q00532 357 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 KCNC4Q03721 635 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 AIMP2Q13155 320 aaKnown RBP12.24□□□□□ -0.45
HDAC1-209ENST00000484305 CSHL1Q14406 222 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 MYBPC3Q14896 1274 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 C18orf21Q32NC0 220 aaPredicted RBP12.24□□□□□ -0.45
HDAC1-209ENST00000484305 TUBB8Q3ZCM7 444 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 TMEM214Q6NUQ4 689 aaKnown RBP12.24□□□□□ -0.45
HDAC1-209ENST00000484305 ADAMTSL2Q86TH1 951 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 ASPGQ86U10 573 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 PPM1NQ8N819 430 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 MFSD9Q8NBP5 474 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 CAMKVQ8NCB2 501 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 ZNF740Q8NDX6 193 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 FBF1Q8TES7 1133 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 SLC13A3Q8WWT9 602 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 SLC5A11Q8WWX8 675 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 MOCOSQ96EN8 888 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 TSPAN17Q96FV3 270 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 EGFL8Q99944 293 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 MFRPQ9BY79 579 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 TGIF2Q9GZN2 237 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 DERL2Q9GZP9 239 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 SPNS1Q9H2V7 528 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 ZNF552Q9H707 407 aaPredicted RBP12.24□□□□□ -0.45
HDAC1-209ENST00000484305 MKKSQ9NPJ1 570 aaPredicted RBP12.24□□□□□ -0.45
HDAC1-209ENST00000484305 SLC22A14Q9Y267 594 aa12.24□□□□□ -0.45
HDAC1-209ENST00000484305 NCF1BA6NI72 391 aaPredicted RBP12.23□□□□□ -0.45
HDAC1-209ENST00000484305 NCF1CA8MVU1 366 aaPredicted RBP12.23□□□□□ -0.45
HDAC1-209ENST00000484305 IDSB3KWA1 339 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 OR1F1O43749 312 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 DPM1O60762 260 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 NSA2O95478 260 aaKnown RBP12.23□□□□□ -0.45
HDAC1-209ENST00000484305 NCF1P14598 390 aaPredicted RBP12.23□□□□□ -0.45
HDAC1-209ENST00000484305 IL1RNP18510 177 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 ITGA3P26006 1051 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 STX2P32856 288 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 SPRP35270 261 aaPredicted RBP12.23□□□□□ -0.45
HDAC1-209ENST00000484305 GMPRP36959 345 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 GDF5P43026 501 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 AVPR1BP47901 424 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 CD97P48960 835 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 EFNA3P52797 238 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 FOXK1P85037 733 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 Q0VFX4 171 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.452e-10■■■□□ 17.3
HDAC1-209ENST00000484305 ZKSCAN8Q15776 578 aaPredicted RBP12.23□□□□□ -0.45
HDAC1-209ENST00000484305 GRTP1Q5TC63 336 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 VWA5B1Q5TIE3 1220 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 ATG9BQ674R7 924 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 FAAH2Q6GMR7 532 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 JMJD6Q6NYC1 403 aaPredicted RBP12.23□□□□□ -0.45
HDAC1-209ENST00000484305 FRA10AC1Q70Z53 315 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 PDSS2Q86YH6 399 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 ZC3H7AQ8IWR0 971 aaKnown RBP12.23□□□□□ -0.45
HDAC1-209ENST00000484305 PARP9Q8IXQ6 854 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 MMGT1Q8N4V1 131 aa12.23□□□□□ -0.45
HDAC1-209ENST00000484305 RBMXL3Q8N7X1 1067 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms