RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 COPG2Q9UBF2 871 aa22.23■■□□□ 1.15
SUMO3-205ENST00000466861 RUVBL1Q9Y265 456 aaKnown RBP22.23■■□□□ 1.15
SUMO3-205ENST00000466861 TNPO3Q9Y5L0 923 aaKnown RBP22.23■■□□□ 1.15
SUMO3-205ENST00000466861 DSPP15924 2871 aaKnown RBP22.22■■□□□ 1.15
SUMO3-205ENST00000466861 CLGNO14967 610 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 PRPF4O43172 522 aaKnown RBP eCLIP22.22■■□□□ 1.15
SUMO3-205ENST00000466861 H2AFYO75367 372 aaKnown RBP22.22■■□□□ 1.15
SUMO3-205ENST00000466861 CREG1O75629 220 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 GLRBP48167 497 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 PDK4Q16654 411 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 C18orf21Q32NC0 220 aaPredicted RBP22.22■■□□□ 1.15
SUMO3-205ENST00000466861 ATG9BQ674R7 924 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 VN1R4Q7Z5H5 301 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 TMPRSS11BQ86T26 416 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 PLD3Q8IV08 490 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 TTLQ8NG68 377 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 MZB1Q8WU39 189 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 SLC26A1Q9H2B4 701 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 NT5DC2Q9H857 520 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 STARD5Q9NSY2 213 aa22.22■■□□□ 1.15
SUMO3-205ENST00000466861 IFT80Q9P2H3 777 aaPredicted RBP22.22■■□□□ 1.15
SUMO3-205ENST00000466861 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.22■■□□□ 1.15
SUMO3-205ENST00000466861 GPN3Q9UHW5 284 aaPredicted RBP22.22■■□□□ 1.15
SUMO3-205ENST00000466861 V9GYY5 206 aaPredicted RBP22.22■■□□□ 1.15
SUMO3-205ENST00000466861 K7EPI3 171 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 SHBGP04278 402 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 ITGB2P05107 769 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 GSTA1P08263 222 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 SLC35G6P0C7Q6 338 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 BCL6P41182 706 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 SCTRP47872 440 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 PWP1Q13610 501 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 E2F2Q14209 437 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 NAA30Q147X3 362 aaPredicted RBP22.21■■□□□ 1.15
SUMO3-205ENST00000466861 PCBP2Q15366 365 aaKnown RBP eCLIP22.21■■□□□ 1.15
SUMO3-205ENST00000466861 TBCCQ15814 346 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 LCN10Q6JVE6 187 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 ASPGQ86U10 573 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 TRPV3Q8NET8 790 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 EXT2Q93063 718 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 RNF31Q96EP0 1072 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 C10orf90Q96M02 699 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 MRPL46Q9H2W6 279 aaKnown RBP22.21■■□□□ 1.15
SUMO3-205ENST00000466861 ACTL8Q9H568 366 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 SYNPO2LQ9H987 977 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 OPTCQ9UBM4 332 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 NDOR1Q9UHB4 597 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 ZFP69BQ9UJL9 534 aa22.21■■□□□ 1.15
SUMO3-205ENST00000466861 ZFHX4Q86UP3 3567 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 LCMT2O60294 686 aaKnown RBP22.2■■□□□ 1.14
SUMO3-205ENST00000466861 KATNA1O75449 491 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 GFAPP14136 432 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 CASP2P42575 452 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 PIK3CGP48736 1102 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 LAPTM5Q13571 262 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 C1orf189Q5VU69 101 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 NIPAL1Q6NVV3 410 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 MRPL14Q6P1L8 145 aaKnown RBP22.2■■□□□ 1.14
SUMO3-205ENST00000466861 OVCH1Q7RTY7 1134 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 KRT78Q8N1N4 520 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 SLC13A3Q8WWT9 602 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 WBP1Q96G27 269 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 CRELD1Q96HD1 420 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 EFCAB11Q9BUY7 163 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 ROPN1BQ9BZX4 212 aaPredicted RBP22.2■■□□□ 1.14
SUMO3-205ENST00000466861 WDR54Q9H977 334 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 ROPN1Q9HAT0 212 aaPredicted RBP22.2■■□□□ 1.14
SUMO3-205ENST00000466861 ZNF304Q9HCX3 659 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 NXT1Q9UKK6 140 aaKnown RBP22.2■■□□□ 1.14
SUMO3-205ENST00000466861 TCFL5Q9UL49 500 aa22.2■■□□□ 1.14
SUMO3-205ENST00000466861 FEZF1A0PJY2 475 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 STX16-NPEPL1H3BU86 382 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 STX16O14662 325 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 OR1F1O43749 312 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 CCNT2O60583 730 aaKnown RBP22.19■■□□□ 1.14
SUMO3-205ENST00000466861 CDC20Q12834 499 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 HKDC1Q2TB90 917 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 PAGE2BQ5JRK9 111 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 TMEM214Q6NUQ4 689 aaKnown RBP22.19■■□□□ 1.14
SUMO3-205ENST00000466861 ENDOVQ8N8Q3 282 aaKnown RBP22.19■■□□□ 1.14
SUMO3-205ENST00000466861 SNX31Q8N9S9 440 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 NT5CQ8TCD5 201 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 NACC2Q96BF6 587 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 PTCD3Q96EY7 689 aaKnown RBP22.19■■□□□ 1.14
SUMO3-205ENST00000466861 SCYL1Q96KG9 808 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 DRC3Q9H069 523 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 ZNF358Q9NW07 568 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 XPR1Q9UBH6 696 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 TBK1Q9UHD2 729 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 DCDC2Q9UHG0 476 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 SLC22A7Q9Y694 548 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 CCDC88CQ9P219 2028 aa22.19■■□□□ 1.14
SUMO3-205ENST00000466861 LAMA5O15230 3695 aa22.18■■□□□ 1.14
SUMO3-205ENST00000466861 H0YIG0 161 aa22.18■■□□□ 1.14
SUMO3-205ENST00000466861 P2RX6O15547 441 aa22.18■■□□□ 1.14
SUMO3-205ENST00000466861 SMIM24O75264 130 aa22.18■■□□□ 1.14
SUMO3-205ENST00000466861 EPB42P16452 691 aa22.18■■□□□ 1.14
SUMO3-205ENST00000466861 ITGAXP20702 1163 aa22.18■■□□□ 1.14
SUMO3-205ENST00000466861 PFKFB4Q16877 469 aa22.18■■□□□ 1.14
SUMO3-205ENST00000466861 UGT8Q16880 541 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms