RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 GAREM2Q75VX8 874 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 RNF130Q86XS8 419 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 CELF5Q8N6W0 485 aaKnown RBP8.19□□□□□ -1.1
PTPRK-206ENST00000368215 ZCCHC10Q8TBK6 192 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 BPIFB1Q8TDL5 484 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 WFIKKN2Q8TEU8 576 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 HTRA1Q92743 480 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 RAB8BQ92930 207 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 CLIP3Q96DZ5 547 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 ABHD8Q96I13 439 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 COL21A1Q96P44 957 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 TRMT61BQ9BVS5 477 aaKnown RBP8.19□□□□□ -1.1
PTPRK-206ENST00000368215 ACPTQ9BZG2 426 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 ZCCHC3Q9NUD5 404 aaKnown RBP8.19□□□□□ -1.1
PTPRK-206ENST00000368215 PTBP2Q9UKA9 531 aaKnown RBP8.19□□□□□ -1.1
PTPRK-206ENST00000368215 CNOT11Q9UKZ1 510 aaKnown RBP8.19□□□□□ -1.1
PTPRK-206ENST00000368215 F5P12259 2224 aa8.19□□□□□ -1.1
PTPRK-206ENST00000368215 GLOD5A6NK44 160 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 RTCAO00442 366 aaKnown RBP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 PEX11BO96011 259 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 BCHEP06276 602 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 JUPP14923 745 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 FUT4P22083 530 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 KDELR2P33947 212 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CLCN7P51798 805 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 SPATS1Q496A3 300 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ARMCX4Q5H9R4 360 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 BHLHB9Q6PI77 547 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 HSD11B1LQ7Z5J1 315 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 OR9A1PQ8NGU1 263 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 SLC5A11Q8WWX8 675 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 FOXJ1Q92949 421 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF514Q96K75 400 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 P2RY13Q9BPV8 354 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 PREBQ9HCU5 417 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 AGPAT4Q9NRZ5 378 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF780BQ9Y6R6 833 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TRBC2A0A5B9 178 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 H7BY64 318 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 LSM1O15116 133 aaKnown RBP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TFPTP0C1Z6 253 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CCNYL3P0C7X3 344 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CTSAP10619 480 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ALPPL2P10696 532 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CD36P16671 472 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 RPS3P23396 243 aaKnown RBP eCLIP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TLX1P31314 330 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CENPAP49450 140 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TBPL1P62380 186 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 GRM2Q14416 872 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TRIM71Q2Q1W2 868 aaKnown RBP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 UAP1L1Q3KQV9 507 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 C6orf141Q5SZD1 244 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 HMGN2P46Q86SG4 172 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 KBTBD8Q8NFY9 601 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 HUS1BQ8NHY5 278 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 PRAP1Q96NZ9 151 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 SLC12A9Q9BXP2 914 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ANKRD60Q9BZ19 345 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ATP6V1HQ9UI12 483 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF232Q9UNY5 417 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CCL26Q9Y258 94 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 A0A1B0GVG6 124 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TRIM43BA6NCK2 446 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 PSMD11O00231 422 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 AP3D1O14617 1153 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ABCB7O75027 752 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CTSEP14091 401 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 HPGDP15428 266 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TNFRSF1BP20333 461 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 PTPN5P54829 565 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 PMS2P3Q13401 168 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 GPM6BQ13491 265 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 GRIN2CQ14957 1233 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 PDGFRLQ15198 375 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 DHCR24Q15392 516 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 AAK1Q2M2I8 961 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CEACAM20Q6UY09 585 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CDK20Q8IZL9 346 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TRAM1L1Q8N609 369 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TFAP2CQ92754 450 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 SPATA5L1Q9BVQ7 753 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 XKR8Q9H6D3 395 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 WDR26Q9H7D7 661 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TRNAU1APQ9NX07 287 aaKnown RBP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 FAM25AB3EWG3 89 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 FAM25CB3EWG5 89 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 FAM25GB3EWG6 89 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 OR7A17O14581 309 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 PAK4O96013 591 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 EPCAMP16422 314 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF26P17031 533 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CDH3P22223 829 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TACR1P25103 407 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 HTR1BP28222 390 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 IFNGR2P38484 337 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 MAP2K4P45985 399 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 CTSCP53634 463 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 PNLIPRP1P54315 467 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms