RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 KRT34O76011 436 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 C1GALT1C1LP0DN25 315 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 GPX3P22352 226 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 DIO3P55073 304 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 KCNJ2P63252 427 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 CSTF3Q12996 717 aaKnown RBP11.62□□□□□ -0.55
USF1-203ENST00000368021 LAPTM5Q13571 262 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 KIF19Q2TAC6 998 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 PLA2G2CQ5R387 149 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 NXPE4Q6UWF7 544 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 LAYNQ6UX15 382 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 SNX32Q86XE0 403 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 KIF2BQ8N4N8 673 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 LINC01555Q8NAE3 123 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 RBM15BQ8NDT2 890 aaKnown RBP11.62□□□□□ -0.55
USF1-203ENST00000368021 OR52E1Q8NGJ3 308 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 C1orf216Q8TAB5 229 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 ZFPM2Q8WW38 1151 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 DNASE2BQ8WZ79 361 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 METTL2AQ96IZ6 378 aaKnown RBP11.62□□□□□ -0.55
USF1-203ENST00000368021 TBC1D10AQ9BXI6 508 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 C1orf109Q9NX04 203 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 ASIC5Q9NY37 505 aa11.62□□□□□ -0.55
USF1-203ENST00000368021 TMEM247A6NEH6 219 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 OR5K4A6NMS3 321 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 EML2O95834 649 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 WNT1P04628 370 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 ZNF806P0C7X5 589 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 PIM1P11309 404 aaPredicted RBP11.61□□□□□ -0.55
USF1-203ENST00000368021 ACPPP15309 386 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 CPA2P48052 419 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 PTDSS1P48651 473 aaKnown RBP11.61□□□□□ -0.55
USF1-203ENST00000368021 ARPC4P59998 168 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 HMGCS1Q01581 520 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 TSTA3Q13630 321 aaPredicted RBP11.61□□□□□ -0.55
USF1-203ENST00000368021 RPS6KA2Q15349 733 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 NDUFA5Q16718 116 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 DNAL1Q4LDG9 190 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 SGO1Q5FBB7 561 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 RNF220Q5VTB9 566 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 MED27Q6P2C8 311 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 C17orf64Q86WR6 236 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 ZFAND4Q86XD8 727 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 LAS2Q8IYD9 372 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 PHACTR4Q8IZ21 702 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 ABHD11Q8NFV4 315 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 OR7G3Q8NG95 312 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 TSPEARQ8WU66 669 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 UBE2E3Q969T4 207 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 SH3KBP1Q96B97 665 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 VPS50Q96JG6 964 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 SLC25A23Q9BV35 468 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 PITHD1Q9GZP4 211 aaPredicted RBP11.61□□□□□ -0.55
USF1-203ENST00000368021 PELI2Q9HAT8 420 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 LRTM1Q9HBL6 345 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 OR6C2Q9NZP2 312 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 ZIM2Q9NZV7 527 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 TAAR2Q9P1P5 351 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 ZNF624Q9P2J8 865 aaPredicted RBP11.61□□□□□ -0.55
USF1-203ENST00000368021 KLF15Q9UIH9 416 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 ANGPTL2Q9UKU9 493 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 ICKQ9UPZ9 632 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 SH2B3Q9UQQ2 575 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 CEP250Q9BV73 2442 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 SPTBN4Q9H254 2564 aa11.61□□□□□ -0.55
USF1-203ENST00000368021 KIR2DS5A0A0G2JLQ3 304 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 A0A0G2JNG1 304 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 KIR2DS3K7RE56 304 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 TLR4O00206 839 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 KHNYNO15037 678 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 BCAT2O15382 392 aaPredicted RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 CSF2P04141 144 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 SLC2A4P14672 509 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 NME1P15531 152 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 GNSP15586 552 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 XRCC1P18887 633 aaPredicted RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 VARSP26640 1264 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 SHMT2P34897 504 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 CPOXP36551 454 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 SLC19A1P41440 591 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 CSNK1EP49674 416 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 MTTPP55157 894 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 HPCAP84074 193 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 STX5Q13190 355 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 DCTN2Q13561 401 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 KIR2DS5Q14953 304 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 KIAA0040Q15053 153 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 CSRP2Q16527 193 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 HIST2H2ACQ16777 129 aaPredicted RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 RFTN2Q52LD8 501 aaPredicted RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 AGKQ53H12 422 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 CATSPEREQ5SY80 951 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 HIST2H2AA3Q6FI13 130 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 IYDQ6PHW0 289 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 PRR23CQ6ZRP0 262 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 FAM129CQ86XR2 697 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 SCAIQ8N9R8 606 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 CXorf40BQ96DE9 158 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 MTFMTQ96DP5 389 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms