RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NMBRP28336 390 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 SLC15A3Q8IY34 581 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 HSFY1Q96LI6 401 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 PAPOLGQ9BWT3 736 aaKnown RBP15.97■□□□□ 0.15
PTCH1-201ENST00000331920 DCSTAMPQ9H295 470 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 FZD4Q9ULV1 537 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 SLC7A11Q9UPY5 501 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 PCDHA2Q9Y5H9 948 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 A0A1B0GVM2 712 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 CLDN11O75508 207 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 AHSA1O95433 338 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 NR2C1P13056 603 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 RPL35P42766 123 aaKnown RBP15.97■□□□□ 0.15
PTCH1-201ENST00000331920 EIF2B1Q14232 305 aaKnown RBP15.97■□□□□ 0.15
PTCH1-201ENST00000331920 TPRG1LQ5T0D9 272 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 GBA3Q9H227 469 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 A0A1W2PRB8 838 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 MFSD11O43934 449 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 ATP6V1G1O75348 118 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 TNFP01375 233 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 ABHD2P08910 425 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 C8orf89P0DMQ9 161 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 GP1BBP13224 206 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 RAC2P15153 192 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 CHRNA4P43681 627 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 SOX2P48431 317 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 SLC18A2Q05940 514 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 TRIM28Q13263 835 aaKnown RBP15.97■□□□□ 0.15
PTCH1-201ENST00000331920 FAM46DQ8NEK8 389 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 EPYCQ99645 322 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 DENND2DQ9H6A0 471 aaPredicted RBP15.97■□□□□ 0.15
PTCH1-201ENST00000331920 LRRC4CQ9HCJ2 640 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 KLK3P07288 261 aaPredicted RBP15.97■□□□□ 0.15
PTCH1-201ENST00000331920 EPHA1P21709 976 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 BLKP51451 505 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 NTRK3Q16288 839 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 MON1AQ86VX9 555 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 DDX1Q92499 740 aaKnown RBP15.97■□□□□ 0.15
PTCH1-201ENST00000331920 DEFB118Q96PH6 123 aa15.97■□□□□ 0.15
PTCH1-201ENST00000331920 MRPL15Q9P015 296 aaKnown RBP15.97■□□□□ 0.15
PTCH1-201ENST00000331920 VEGFAP15692 232 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-201ENST00000331920 GALK2Q01415 458 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 COL9A2Q14055 689 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-201ENST00000331920 DPYSL2Q16555 572 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 CNPY1Q3B7I2 92 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 THAP3Q8WTV1 239 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-201ENST00000331920 BSCL2Q96G97 398 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-201ENST00000331920 TMEM100Q9NV29 134 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 WDR45Q9Y484 360 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 HMX3A6NHT5 357 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 C9orf57Q5W0N0 161 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 TRIM74Q86UV6 250 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 TRIM73Q86UV7 250 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 PIAS4Q8N2W9 510 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-201ENST00000331920 NFKBIDQ8NI38 313 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 KCTD15Q96SI1 283 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-201ENST00000331920 TRMOQ9BU70 441 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 TAS2R1Q9NYW7 299 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 FRMPD4Q14CM0 1322 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 DNAJA2O60884 412 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 EEF1A2Q05639 463 aaKnown RBP15.96■□□□□ 0.15
PTCH1-201ENST00000331920 FAM189A2Q15884 450 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 HSPBAP1Q96EW2 488 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 CARS2Q9HA77 564 aaKnown RBP15.96■□□□□ 0.15
PTCH1-201ENST00000331920 CDC42BPBQ9Y5S2 1711 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 ADRB2P07550 413 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 RABGGTBP53611 331 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 RAB5BP61020 215 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 ZNF584Q8IVC4 421 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 OR4C15Q8NGM1 316 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 CD180Q99467 661 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 PLAGL1Q9UM63 463 aa15.96■□□□□ 0.15
PTCH1-201ENST00000331920 SGCEO43556 437 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 CD3GP09693 182 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 HOXB9P17482 250 aaPredicted RBP15.96■□□□□ 0.14
PTCH1-201ENST00000331920 IDH3AP50213 366 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 RTP1P59025 263 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 HTD2P86397 168 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 SLC30A8Q8IWU4 369 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 MYEF2Q9P2K5 600 aaKnown RBP15.96■□□□□ 0.14
PTCH1-201ENST00000331920 C2orf72A6NCS6 295 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 PRORSD1PA6NEY8 169 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 TGM6O95932 706 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 C8GP07360 202 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 RPS17P08708 135 aaKnown RBP15.96■□□□□ 0.14
PTCH1-201ENST00000331920 TMEM44Q2T9K0 475 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 ERN2Q76MJ5 926 aaKnown RBP15.96■□□□□ 0.14
PTCH1-201ENST00000331920 BBS1Q8NFJ9 593 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 PDCD1LG2Q9BQ51 273 aa15.96■□□□□ 0.14
PTCH1-201ENST00000331920 ZNF705GA8MUZ8 300 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-201ENST00000331920 SCELO95171 688 aa15.95■□□□□ 0.14
PTCH1-201ENST00000331920 RPL10P27635 214 aaKnown RBP15.95■□□□□ 0.14
PTCH1-201ENST00000331920 PSPHP78330 225 aa15.95■□□□□ 0.14
PTCH1-201ENST00000331920 LENG8Q96PV6 779 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-201ENST00000331920 RBCK1Q9BYM8 510 aa15.95■□□□□ 0.14
PTCH1-201ENST00000331920 PCDHB3Q9Y5E6 796 aa15.95■□□□□ 0.14
PTCH1-201ENST00000331920 SH3PXD2BA1X283 911 aa15.95■□□□□ 0.14
PTCH1-201ENST00000331920 C1orf196B1AJZ1 125 aa15.95■□□□□ 0.14
PTCH1-201ENST00000331920 GBAP04062 536 aa15.95■□□□□ 0.14
PTCH1-201ENST00000331920 ACP5P13686 325 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms