RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 APOLD1Q96LR9 279 aa21.78■■□□□ 1.08
CDX1-201ENST00000231656 TCEAL2Q9H3H9 227 aaPredicted RBP21.78■■□□□ 1.08
CDX1-201ENST00000231656 DTNAQ9Y4J8 743 aa21.78■■□□□ 1.08
CDX1-201ENST00000231656 SNX13Q9Y5W8 968 aa21.78■■□□□ 1.08
CDX1-201ENST00000231656 KCNE2Q9Y6J6 123 aa21.78■■□□□ 1.08
CDX1-201ENST00000231656 PCM1Q15154 2024 aa21.77■■□□□ 1.08
CDX1-201ENST00000231656 KCNH1O95259 989 aa21.77■■□□□ 1.08
CDX1-201ENST00000231656 SELPLGQ14242 412 aa21.77■■□□□ 1.08
CDX1-201ENST00000231656 NOXRED1Q6NXP6 359 aa21.77■■□□□ 1.08
CDX1-201ENST00000231656 IRGCQ6NXR0 463 aa21.77■■□□□ 1.08
CDX1-201ENST00000231656 FBXL6Q8N531 539 aa21.77■■□□□ 1.08
CDX1-201ENST00000231656 ADCY4Q8NFM4 1077 aa21.77■■□□□ 1.08
CDX1-201ENST00000231656 OR5AR1Q8NGP9 310 aa21.77■■□□□ 1.08
CDX1-201ENST00000231656 WDR34Q96EX3 536 aa21.77■■□□□ 1.08
CDX1-201ENST00000231656 INSM2Q96T92 566 aaPredicted RBP21.77■■□□□ 1.08
CDX1-201ENST00000231656 PRDM8Q9NQV8 689 aa21.77■■□□□ 1.08
CDX1-201ENST00000231656 PDZK1P1A8MUH7 402 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 TLR4O00206 839 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 HSD3B1P14060 373 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 NPPBP16860 134 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 HSD3B2P26439 372 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 HTR1EP28566 365 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 CLNS1AP54105 237 aaKnown RBP21.76■■□□□ 1.07
CDX1-201ENST00000231656 CLCA4Q14CN2 919 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 MAPKAPK3Q16644 382 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 UAP1L1Q3KQV9 507 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 SPPL2CQ8IUH8 684 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 RIMKLAQ8IXN7 391 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 OR8J3Q8NGG0 315 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 GAB3Q8WWW8 586 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 N4BP2L2Q92802 583 aaPredicted RBP21.76■■□□□ 1.07
CDX1-201ENST00000231656 TSSK3Q96PN8 268 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 BRF2Q9HAW0 419 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 ARMC1Q9NVT9 282 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 VAPAQ9P0L0 249 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 VPS29Q9UBQ0 182 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 TBC1D29Q9UFV1 150 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 FBXO4Q9UKT5 387 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 PPT2Q9UMR5 302 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 SH2B3Q9UQQ2 575 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 VPS13AQ96RL7 3174 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 DFNA5O60443 496 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 PNLIPRP1P54315 467 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 PHC1P78364 1004 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 TAP2Q03519 686 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 SLC30A9Q6PML9 568 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 BMP8AQ7Z5Y6 402 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 IFNEQ86WN2 208 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 NRROSQ86YC3 692 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 CATSPER1Q8NEC5 780 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 OR5K2Q8NHB8 316 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 CANT1Q8WVQ1 401 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 TESCQ96BS2 214 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 C12orf66Q96MD2 445 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 OR52E6Q96RD3 313 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 MTERF1Q99551 399 aaKnown RBP21.76■■□□□ 1.07
CDX1-201ENST00000231656 CCM2LQ9NUG4 571 aaPredicted RBP21.76■■□□□ 1.07
CDX1-201ENST00000231656 USP22Q9UPT9 525 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 PCDHGA11Q9Y5H2 935 aa21.76■■□□□ 1.07
CDX1-201ENST00000231656 RPN2P04844 631 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 ACTR1BP42025 376 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 MTPNP58546 118 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 ACTR1AP61163 376 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 PLIN5Q00G26 463 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 ADNP2Q6IQ32 1131 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 TMPRSS11BQ86T26 416 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 C11orf74Q86VG3 221 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 DCUN1D3Q8IWE4 304 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 MSRB3Q8IXL7 192 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 PHACTR4Q8IZ21 702 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 LMNTD1Q8N9Z9 388 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 OR7G3Q8NG95 312 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 LRTOMTQ8WZ04 291 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 C11orf24Q96F05 449 aaPredicted RBP21.75■■□□□ 1.07
CDX1-201ENST00000231656 METTL2AQ96IZ6 378 aaKnown RBP21.75■■□□□ 1.07
CDX1-201ENST00000231656 DYRK1BQ9Y463 629 aa21.75■■□□□ 1.07
CDX1-201ENST00000231656 TP53BP1Q12888 1972 aaPredicted RBP21.75■■□□□ 1.07
CDX1-201ENST00000231656 TRBV5-3A0A0A0MS03 114 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 BCAT2O15382 392 aaPredicted RBP21.74■■□□□ 1.07
CDX1-201ENST00000231656 GPR37L1O60883 481 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 BLKP51451 505 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 OR4D2P58180 307 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 ILF3Q12906 894 aaKnown RBP eCLIP21.74■■□□□ 1.07
CDX1-201ENST00000231656 DDX39BQ13838 428 aaKnown RBP21.74■■□□□ 1.07
CDX1-201ENST00000231656 PMS2CLQ68D20 193 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 DUS1LQ6P1R4 473 aaKnown RBP21.74■■□□□ 1.07
CDX1-201ENST00000231656 ABRAXAS1Q6UWZ7 409 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 WASH2PQ6VEQ5 465 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 GPBAR1Q8TDU6 330 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 RAD51AP1Q96B01 352 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 EFHD1Q9BUP0 239 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 WASH6PQ9NQA3 447 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 SLC25A37Q9NYZ2 338 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 SCHIP1Q9P0W5 487 aaPredicted RBP21.74■■□□□ 1.07
CDX1-201ENST00000231656 PCOLCE2Q9UKZ9 415 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 MAN2B2Q9Y2E5 1009 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 PCDHB3Q9Y5E6 796 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 TNRC6BQ9UPQ9 1833 aaKnown RBP21.74■■□□□ 1.07
CDX1-201ENST00000231656 TCRBV5S2A0A599 114 aa21.74■■□□□ 1.07
CDX1-201ENST00000231656 DHRS12A0PJE2 317 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms