RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 VPS35Q96QK1 796 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 POLR1EQ9GZS1 481 aaKnown RBP17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 TIGARQ9NQ88 270 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 PRDM5Q9NQX1 630 aaPredicted RBP17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 B8ZZF3 427 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 GPX5O75715 221 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 EOMESO95936 686 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 EPOP01588 193 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 SELPP16109 830 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 PIANPQ8IYJ0 282 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 RGL4Q8IZJ4 473 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 TCTE3Q8IZS6 198 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 PGBD3Q8N328 593 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 VWA5B2Q8N398 1253 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 LSMEM1Q8N8F7 131 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 BBS2Q9BXC9 721 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 BARHL1Q9BZE3 327 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 ABCB8Q9NUT2 735 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 WBP1LQ9NX94 342 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 ZNF226Q9NYT6 803 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 ZNF451Q9Y4E5 1061 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 EFCAB10A6NFE3 127 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 CDK2AP1O14519 115 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 ESR1P03372 595 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 CCL5P13501 91 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 KDELR2P33947 212 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 IL12RB1P42701 662 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 HSPA7P48741 367 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 ASAH1Q13510 395 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 EIF4HQ15056 248 aaKnown RBP17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 PSAPL1Q6NUJ1 521 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 EIF3MQ7L2H7 374 aaKnown RBP17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 ZNF605Q86T29 641 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 RTN4RL1Q86UN2 441 aaPredicted RBP17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 LAX1Q8IWV1 398 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 ZNF683Q8IZ20 524 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 TTC16Q8NEE8 873 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 UBASH3BQ8TF42 649 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 EPYCQ99645 322 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 TMEM248Q9NWD8 314 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 PTPRDP23468 1912 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 B4DXG7 233 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 IDH2P48735 452 aaKnown RBP17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 PXNP49023 591 aaPredicted RBP17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 SCN1BQ07699 218 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 VMACQ2NL98 169 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 IQCCQ4KMZ1 466 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 SLC39A12Q504Y0 691 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 OR4F3Q6IEY1 312 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 IDO2Q6ZQW0 420 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 CBLL1Q75N03 491 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 SERPINA11Q86U17 422 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 PLCZ1Q86YW0 608 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 ZZZ3Q8IYH5 903 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 OR4M1Q8NGD0 313 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 HASPINQ8TF76 798 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 MGLLQ99685 303 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 RTP3Q9BQQ7 232 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 ZYG11BQ9C0D3 744 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 DIABLOQ9NR28 239 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 GPRC5BQ9NZH0 403 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 COMMD10Q9Y6G5 202 aa17.1■□□□□ 0.33
CDKN1B-201ENST00000228872 MEN1O00255 615 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 SHOXO15266 292 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 ARHGEF9O43307 516 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 B3GAT3O94766 335 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 GABRB1P18505 474 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 CD9P21926 228 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 PCSK1P29120 753 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 RPS19P39019 145 aaKnown RBP17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 PBX3P40426 434 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 FAM189BP81408 668 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 DAB2P98082 770 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 MED22Q15528 200 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 SSX1Q16384 188 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 SLC24A5Q71RS6 500 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 TRIM46Q7Z4K8 759 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 SCD5Q86SK9 330 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 TRIM48Q8IWZ4 208 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 EFHBQ8N7U6 833 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 GALNT6Q8NCL4 622 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 OR10T2Q8NGX3 314 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 DEDD2Q8WXF8 326 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 REPS1Q96D71 796 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 UROC1Q96N76 676 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 FRMD6Q96NE9 622 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 TTLL2Q9BWV7 592 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 ASPNQ9BXN1 380 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 NT5C1B-RDH14C9J2C7 533 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 ADRA2AP08913 450 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 ODC1P11926 461 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 GZMKP49863 264 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 RPS14P62263 151 aaKnown RBP17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 IL10RBQ08334 325 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 DOC2BQ14184 412 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 PDE12Q6L8Q7 609 aaKnown RBP17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 DPY19L3Q6ZPD9 716 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 GLRX5Q86SX6 157 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 YIPF7Q8N8F6 280 aa17.09■□□□□ 0.33
CDKN1B-201ENST00000228872 C9orf43Q8TAL5 461 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms