RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 C9orf72Q96LT7 481 aa7.88□□□□□ -1.15
TARDBP-224ENST00000621573 GFM1Q96RP9 751 aaKnown RBP7.88□□□□□ -1.15
TARDBP-224ENST00000621573 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.88□□□□□ -1.15
TARDBP-224ENST00000621573 LRRN3Q9H3W5 708 aa7.88□□□□□ -1.15
TARDBP-224ENST00000621573 COG4Q9H9E3 785 aa7.88□□□□□ -1.15
TARDBP-224ENST00000621573 POT1Q9NUX5 634 aa7.88□□□□□ -1.15
TARDBP-224ENST00000621573 INTS10Q9NVR2 710 aaKnown RBP7.88□□□□□ -1.15
TARDBP-224ENST00000621573 ZNF624Q9P2J8 865 aaPredicted RBP7.88□□□□□ -1.15
TARDBP-224ENST00000621573 PCDHB1Q9Y5F3 818 aa7.88□□□□□ -1.15
TARDBP-224ENST00000621573 USP34Q70CQ2 3546 aa7.88□□□□□ -1.15
TARDBP-224ENST00000621573 MYO15AQ9UKN7 3530 aa7.88□□□□□ -1.15
TARDBP-224ENST00000621573 ARHGEF17Q96PE2 2063 aaPredicted RBP7.87□□□□□ -1.15
TARDBP-224ENST00000621573 PRAMEF33A0A0G2JMD5 474 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 MED19A0JLT2 244 aaPredicted RBP7.87□□□□□ -1.15
TARDBP-224ENST00000621573 FAM149AA5PLN7 773 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 KPNA5O15131 536 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 B4GAT1O43505 415 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 NIPSNAP2O75323 286 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 HAUS5O94927 633 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 TOP3BO95985 862 aaKnown RBP7.87□□□□□ -1.15
TARDBP-224ENST00000621573 PLATP00750 562 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 ADRB1P08588 477 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 MTHFD1P11586 935 aaKnown RBP7.87□□□□□ -1.15
TARDBP-224ENST00000621573 PKMP14618 531 aaKnown RBP7.87□□□□□ -1.15
TARDBP-224ENST00000621573 AMD1P17707 334 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 XRCC1P18887 633 aaPredicted RBP7.87□□□□□ -1.15
TARDBP-224ENST00000621573 SSTR1P30872 391 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 CCR7P32248 378 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 GPR3P46089 330 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 FASLGP48023 281 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 UBE2IP63279 158 aaKnown RBP7.87□□□□□ -1.15
TARDBP-224ENST00000621573 MGAT5Q09328 741 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 RPA4Q13156 261 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 RNF151Q2KHN1 245 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 CTSL3PQ5NE16 218 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.87□□□□□ -1.15
TARDBP-224ENST00000621573 TEDDM1Q5T9Z0 273 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 NKAIN2Q5VXU1 208 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 CNSTQ6PJW8 725 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 C3orf62Q6ZUJ4 267 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 TMEM26Q6ZUK4 368 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 OTOAQ7RTW8 1153 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 SPRED1Q7Z699 444 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 TMPRSS12Q86WS5 348 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 OR10G6Q8NH81 332 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 CFAP61Q8NHU2 1237 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 SKA2Q8WVK7 121 aaPredicted RBP7.87□□□□□ -1.15
TARDBP-224ENST00000621573 ASZ1Q8WWH4 475 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 CDKL2Q92772 493 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 RMDN2Q96LZ7 410 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 BIRC8Q96P09 236 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 SCNM1Q9BWG6 230 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 FAM129AQ9BZQ8 928 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 P2RY12Q9H244 342 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 PLAC1Q9HBJ0 212 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 ZDHHC18Q9NUE0 388 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 SLC17A6Q9P2U8 582 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 ASF1AQ9Y294 204 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 VWA7Q9Y334 891 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 HEBP2Q9Y5Z4 205 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 COLEC10Q9Y6Z7 277 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 ASXL3Q9C0F0 2248 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 ZNF292O60281 2723 aa7.87□□□□□ -1.15
TARDBP-224ENST00000621573 SCN8AQ9UQD0 1980 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 A0A1W2PQM1 296 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 SLC5A10A0PJK1 596 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 CASC3O15234 703 aaKnown RBP7.86□□□□□ -1.15
TARDBP-224ENST00000621573 GSTA2P09210 222 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 CLEC2LP0C7M8 214 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 NDUFS1P28331 727 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 ABCG1P45844 678 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 LEPRP48357 1165 aaKnown RBP7.86□□□□□ -1.15
TARDBP-224ENST00000621573 CD151P48509 253 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 ADARP55265 1226 aaKnown RBP7.86□□□□□ -1.15
TARDBP-224ENST00000621573 ABRQ12979 859 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 TARDBPQ13148 414 aaKnown RBP eCLIP7.86□□□□□ -1.151e-13■■■■■ 26.9
TARDBP-224ENST00000621573 CUL1Q13616 776 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 GPR18Q14330 331 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 FRG1Q14331 258 aaKnown RBP7.86□□□□□ -1.15
TARDBP-224ENST00000621573 MAP9Q49MG5 647 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 CAPRIN2Q6IMN6 1127 aaKnown RBP7.86□□□□□ -1.15
TARDBP-224ENST00000621573 DUS1LQ6P1R4 473 aaKnown RBP7.86□□□□□ -1.15
TARDBP-224ENST00000621573 RBM44Q6ZP01 1051 aaKnown RBP7.86□□□□□ -1.15
TARDBP-224ENST00000621573 KIAA0408Q6ZU52 694 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 PIM3Q86V86 326 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 MARCH9Q86YJ5 346 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 CTAGE3PQ8IX95 158 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 CMIPQ8IY22 773 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 GPATCH11Q8N954 259 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 JPH3Q8WXH2 748 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-224ENST00000621573 NCSTNQ92542 709 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 TFGQ92734 400 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-224ENST00000621573 FMO2Q99518 471 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 NDNQ99608 321 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 TBC1D10AQ9BXI6 508 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 TSPYL1Q9H0U9 437 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 OR10A2Q9H208 303 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 OR52A5Q9H2C5 316 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 SLC40A1Q9NP59 571 aa7.86□□□□□ -1.15
TARDBP-224ENST00000621573 MOCS1Q9NZB8 636 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms