RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 CUEDC1Q9NWM3 386 aaPredicted RBP18.13■□□□□ 0.49
CCDC28A-203ENST00000617445 LUZP4Q9P127 313 aa18.13■□□□□ 0.49
CCDC28A-203ENST00000617445 MAP10Q9P2G4 905 aa18.13■□□□□ 0.49
CCDC28A-203ENST00000617445 RNF14Q9UBS8 474 aa18.13■□□□□ 0.49
CCDC28A-203ENST00000617445 SAR1BQ9Y6B6 198 aa18.13■□□□□ 0.49
CCDC28A-203ENST00000617445 POLEQ07864 2286 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 PABPN1LA6NDY0 278 aaKnown RBP18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 IDSB3KWA1 339 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 TCP11X1B4DZS4 312 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 H0YIG0 161 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 MASP2O00187 686 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 NDC80O14777 642 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 CYC1P08574 325 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 GP1BBP13224 206 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 AVPR1BP47901 424 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 CDKN2DP55273 166 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 AP1S2P56377 157 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 GNG11P61952 73 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 TBPL1P62380 186 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 AP2B1P63010 937 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 AGTRAPQ6RW13 159 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 ISLR2Q6UXK2 745 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 C17orf64Q86WR6 236 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 CREG2Q8IUH2 290 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 PARP9Q8IXQ6 854 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 AMER3Q8N944 861 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 THOC3Q96J01 351 aaKnown RBP18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 PSMG3-AS1Q96PY0 264 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 NAPGQ99747 312 aaPredicted RBP18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 HAUS8Q9BT25 410 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 VWA7Q9Y334 891 aa18.12■□□□□ 0.49
CCDC28A-203ENST00000617445 NSG1A0A0A6YYJ2 146 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 FOXS1O43638 330 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 BANF1O75531 89 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 AGFG2O95081 481 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 HEXBP07686 556 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 GRK3P35626 688 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 ELK3P41970 407 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 PAFAH1B1P43034 410 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 ARL4CP56559 192 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 PDAP1Q13442 181 aaKnown RBP18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 HIF1AQ16665 826 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 PRR30Q53SZ7 412 aaPredicted RBP18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 CRB2Q5IJ48 1285 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 RBM20Q5T481 1227 aaKnown RBP18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 STEAP4Q687X5 459 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 FAM45BPQ6NSW5 357 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 HIBCHQ6NVY1 386 aaPredicted RBP18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 LCTLQ6UWM7 567 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 LAPTM4BQ86VI4 370 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 IGDCC3Q8IVU1 814 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 KLHL7Q8IXQ5 586 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 KBTBD2Q8IY47 623 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 PRSS58Q8IYP2 241 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 CISD2Q8N5K1 135 aaKnown RBP18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 CAMKVQ8NCB2 501 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 FAM45AQ8TCE6 357 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 ATL1Q8WXF7 558 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 LINGO1Q96FE5 620 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 CAPZA3Q96KX2 299 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 BARD1Q99728 777 aaKnown RBP18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 SGPP1Q9BX95 441 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 SYNPO2LQ9H987 977 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 ZBTB20Q9HC78 741 aaPredicted RBP18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 LRRC4CQ9HCJ2 640 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 ADAMTS6Q9UKP5 1117 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 PCDHGA10Q9Y5H3 936 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 COPG1Q9Y678 874 aaKnown RBP18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 TEX264Q9Y6I9 313 aa18.11■□□□□ 0.49
CCDC28A-203ENST00000617445 A0A0A6YYC8 382 aaPredicted RBP18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 I3L1I5 382 aaPredicted RBP18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 NSA2O95478 260 aaKnown RBP18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 ICAM2P13598 275 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 CSNK1G2P78368 415 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 ILF2Q12905 390 aaKnown RBP18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 NAE1Q13564 534 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 B3GNTL1Q67FW5 361 aaPredicted RBP18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 DUPD1Q68J44 220 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 CAPN13Q6MZZ7 669 aaPredicted RBP18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 RIPOR1Q6ZS17 1223 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 CUZD1Q86UP6 607 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 DNAJB14Q8TBM8 379 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 CFAP36Q96G28 342 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 SNF8Q96H20 258 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 PDLIM5Q96HC4 596 aaKnown RBP18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 ZNF160Q9HCG1 818 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 AGPAT4Q9NRZ5 378 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 RIC8BQ9NVN3 520 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 ASF1BQ9NVP2 202 aa18.1■□□□□ 0.49
CCDC28A-203ENST00000617445 LOC102723996A0A087X1L8 192 aa18.09■□□□□ 0.49
CCDC28A-203ENST00000617445 P2RX6O15547 441 aa18.09■□□□□ 0.49
CCDC28A-203ENST00000617445 ALOX12BO75342 701 aa18.09■□□□□ 0.49
CCDC28A-203ENST00000617445 CBX6O95503 412 aa18.09■□□□□ 0.49
CCDC28A-203ENST00000617445 TSPAN12O95859 305 aa18.09■□□□□ 0.49
CCDC28A-203ENST00000617445 SERPINA7P05543 415 aa18.09■□□□□ 0.49
CCDC28A-203ENST00000617445 ENO2P09104 434 aaPredicted RBP18.09■□□□□ 0.49
CCDC28A-203ENST00000617445 COX6A1P12074 109 aa18.09■□□□□ 0.49
CCDC28A-203ENST00000617445 TSFMP43897 325 aaKnown RBP18.09■□□□□ 0.49
CCDC28A-203ENST00000617445 GLRBP48167 497 aa18.09■□□□□ 0.49
CCDC28A-203ENST00000617445 Q0VFX4 171 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms