RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 VWA2Q5GFL6 755 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 CELF3Q5SZQ8 465 aaKnown RBP0.83□□□□□ -2.28
CEP290-208ENST00000604024 TMEM198Q66K66 360 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 EMBQ6PCB8 327 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 FIGLAQ6QHK4 219 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 REG3GQ6UW15 175 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ZNF600Q6ZNG1 722 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 RPAINQ86UA6 219 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 SLC22A15Q8IZD6 547 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 RTL3Q8N8U3 475 aaKnown RBP0.83□□□□□ -2.28
CEP290-208ENST00000604024 ANKRD42Q8N9B4 389 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 RNF138Q8WVD3 245 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ZUFSPQ96AP4 578 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 OSGEPL1Q9H4B0 414 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 CYTL1Q9NRR1 136 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 BAIAP2L1Q9UHR4 511 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 FBXL4Q9UKA2 621 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ZNF148Q9UQR1 794 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 A0A1W2PPQ1 181 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 H3BQ06 376 aaPredicted RBP0.83□□□□□ -2.28
CEP290-208ENST00000604024 TPPPO94811 219 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 OR2C1O95371 312 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ATP1B1P05026 303 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 RB1P06400 928 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 GIG44P09565 113 aaPredicted RBP0.83□□□□□ -2.28
CEP290-208ENST00000604024 IRF2P14316 349 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 AOC1P19801 751 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 GSK3BP49841 420 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 KHKP50053 298 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 CCR3P51677 355 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 NDUFV3P56181 108 aaKnown RBP0.83□□□□□ -2.28
CEP290-208ENST00000604024 KRT33BQ14525 404 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 TIMM50Q3ZCQ8 353 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 RNASEH2BQ5TBB1 312 aaKnown RBP0.83□□□□□ -2.28
CEP290-208ENST00000604024 Q8N9L7 120 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 OR11H4Q8NGC9 324 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 LINC01006Q8NI28 216 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ADAMTS16Q8TE57 1224 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ARPC5LQ9BPX5 153 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 PAXXQ9BUH6 204 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 SDCBP2Q9H190 292 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 EGLN3Q9H6Z9 239 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 THYN1Q9P016 225 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 E2F3O00716 465 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 IPO8O15397 1037 aaKnown RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 PHF1O43189 567 aaPredicted RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 KBTBD11O94819 623 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 DNTTP04053 509 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 HAPLN1P10915 354 aaPredicted RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 GJA1P17302 382 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 CETN2P41208 172 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 OR1D5P58170 312 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 TMCO3Q6UWJ1 677 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 IGFL2Q6UWQ7 119 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 CEP57Q86XR8 500 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 LYPD1Q8N2G4 141 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 NOA1Q8NC60 698 aaKnown RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 ELMOD3Q96FG2 381 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 SCLT1Q96NL6 688 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 RTBDNQ9BSG5 229 aaPredicted RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 CCDC28BQ9BUN5 200 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 HRH4Q9H3N8 390 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 GSN-AS1Q9NRJ2 163 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 GGA3Q9NZ52 723 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 FRMD4AQ9P2Q2 1039 aaPredicted RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 ZNF69Q9UC07 566 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 POLLQ9UGP5 575 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 ABT1Q9ULW3 272 aaKnown RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 CDC42BPBQ9Y5S2 1711 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 CASTOR2A6NHX0 329 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 SNURFLB1AK76 121 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 TNFSF11O14788 317 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 LINGO3P0C6S8 592 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 RARGP13631 454 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 ARL3P36405 182 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 DNA2P51530 1060 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 CDH8P55286 799 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 HNRNPKP61978 463 aaKnown RBP eCLIP0.82□□□□□ -2.28
CEP290-208ENST00000604024 OPCMLQ14982 345 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 C16orf72Q14CZ0 275 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 MLF2Q15773 248 aaPredicted RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 C10orf62Q5T681 223 aaPredicted RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 CPLX4Q7Z7G2 160 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 RPAP2Q8IXW5 612 aaPredicted RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 LGI2Q8N0V4 545 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 OR10S1Q8NGN2 331 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 CASP10Q92851 521 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 Q9H8V8 135 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.82□□□□□ -2.28
CEP290-208ENST00000604024 IL17CQ9P0M4 197 aa0.82□□□□□ -2.28
CEP290-208ENST00000604024 ZHX1Q9UKY1 873 aaPredicted RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 EIF4G1Q04637 1599 aaKnown RBP0.82□□□□□ -2.28
CEP290-208ENST00000604024 RIMBP3CA6NJZ7 1639 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 RIMBP3BA6NNM3 1639 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 RIMBP3Q9UFD9 1639 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 TRAV24A0A0B4J272 114 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 UMPSP11172 480 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 EPCAMP16422 314 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 C4BPBP20851 252 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 MDKP21741 143 aaPredicted RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms