RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 OR2L3Q8NG85 312 aa16.41■□□□□ 0.22
RETREG3-210ENST00000590541 AGAP11Q8TF27 550 aa16.41■□□□□ 0.22
RETREG3-210ENST00000590541 PHF10Q8WUB8 498 aaKnown RBP16.41■□□□□ 0.22
RETREG3-210ENST00000590541 CABS1Q96KC9 395 aa16.41■□□□□ 0.22
RETREG3-210ENST00000590541 SIGLEC12Q96PQ1 595 aa16.41■□□□□ 0.22
RETREG3-210ENST00000590541 TUBB6Q9BUF5 446 aa16.41■□□□□ 0.22
RETREG3-210ENST00000590541 YIPF2Q9BWQ6 316 aa16.41■□□□□ 0.22
RETREG3-210ENST00000590541 HES7Q9BYE0 225 aa16.41■□□□□ 0.22
RETREG3-210ENST00000590541 TGIF2Q9GZN2 237 aa16.41■□□□□ 0.22
RETREG3-210ENST00000590541 SYNPO2LQ9H987 977 aa16.41■□□□□ 0.22
RETREG3-210ENST00000590541 MRFAP1Q9Y605 127 aa16.41■□□□□ 0.22
RETREG3-210ENST00000590541 ZNF469Q96JG9 3925 aaPredicted RBP16.4■□□□□ 0.22
RETREG3-210ENST00000590541 A0A1W2PPV9 198 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 OR2A25A4D2G3 310 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 KRT87PA6NCN2 255 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 ASPDHA6ND91 283 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 IQCF5A8MTL0 148 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 NPIPA5E9PKD4 350 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 ADAM10O14672 748 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 TTI1O43156 1089 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 RPS3P23396 243 aaKnown RBP eCLIP16.4■□□□□ 0.223e-7■■■□□ 15.9
RETREG3-210ENST00000590541 EMP3P54852 163 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 ALDH6A1Q02252 535 aaKnown RBP16.4■□□□□ 0.22
RETREG3-210ENST00000590541 TMED2Q15363 201 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 CCSMST1Q4G0I0 132 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 MRNIPQ6NTE8 343 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 SDCCAG8Q86SQ7 713 aaPredicted RBP16.4■□□□□ 0.22
RETREG3-210ENST00000590541 SIAH3Q8IW03 269 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 CHERPQ8IWX8 916 aaKnown RBP16.4■□□□□ 0.22
RETREG3-210ENST00000590541 BEST3Q8N1M1 668 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 MDS2Q8NDY4 140 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 OR2A1Q8NGT9 310 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 MVB12AQ96EY5 273 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 DMRTA2Q96SC8 542 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 TCF12Q99081 682 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 ZFYVE21Q9BQ24 234 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 RAB11FIP5Q9BXF6 653 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 GRPEL1Q9HAV7 217 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 MKKSQ9NPJ1 570 aaPredicted RBP16.4■□□□□ 0.22
RETREG3-210ENST00000590541 TEKT2Q9UIF3 430 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 GNPTGQ9UJJ9 305 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 NPIPA1Q9UND3 350 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 CDC14AQ9UNH5 594 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 NAV3Q8IVL0 2385 aa16.4■□□□□ 0.22
RETREG3-210ENST00000590541 MAGEB16A2A368 324 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 A8MUI8 341 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 H0YGG7 62 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 PRPF4O43172 522 aaKnown RBP eCLIP16.39■□□□□ 0.21
RETREG3-210ENST00000590541 NDUFS3O75489 264 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 SLCO2B1O94956 709 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 MLYCDO95822 493 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 ERVK-10P10266 1014 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 MLNP12872 115 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 CD99P14209 185 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 IGFBP2P18065 325 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 PAMP19021 973 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 ARF3P61204 181 aaPredicted RBP16.39■□□□□ 0.21
RETREG3-210ENST00000590541 TUBA3CQ13748 450 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 SEMA3AQ14563 771 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 CYP1B1Q16678 543 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 SYT16Q17RD7 645 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 RNF187Q5TA31 235 aaPredicted RBP16.39■□□□□ 0.21
RETREG3-210ENST00000590541 FCRLBQ6BAA4 426 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 PTRHD1Q6GMV3 140 aaKnown RBP16.39■□□□□ 0.21
RETREG3-210ENST00000590541 TUBA3EQ6PEY2 450 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 C3P1Q6ZMU1 363 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 DOLPP1Q86YN1 238 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 ZC3H7AQ8IWR0 971 aaKnown RBP16.39■□□□□ 0.21
RETREG3-210ENST00000590541 GSDMBQ8TAX9 411 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 HMGCLL1Q8TB92 370 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 MAGOHBQ96A72 148 aaKnown RBP16.39■□□□□ 0.21
RETREG3-210ENST00000590541 SDCCAG3Q96C92 435 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 MMABQ96EY8 250 aaPredicted RBP16.39■□□□□ 0.21
RETREG3-210ENST00000590541 SCMH1Q96GD3 660 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 FRMD6Q96NE9 622 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 TRIM51Q9BSJ1 452 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 KLHL1Q9NR64 748 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 TNFRSF10DQ9UBN6 386 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 SOX13Q9UN79 622 aa16.39■□□□□ 0.21
RETREG3-210ENST00000590541 RUVBL1Q9Y265 456 aaKnown RBP16.39■□□□□ 0.21
RETREG3-210ENST00000590541 E9PLN8 166 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 H3BMM5 538 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 PGRMC1O00264 195 aaKnown RBP16.38■□□□□ 0.21
RETREG3-210ENST00000590541 CES2O00748 559 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 FOXS1O43638 330 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 ASNA1O43681 348 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 KRT14P02533 472 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 ABOP16442 354 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 MGAT1P26572 445 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 AOAHP28039 575 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 NMBRP28336 390 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 BDKRB1P46663 353 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 ST13P50502 369 aaKnown RBP16.38■□□□□ 0.21
RETREG3-210ENST00000590541 ADARP55265 1226 aaKnown RBP16.38■□□□□ 0.21
RETREG3-210ENST00000590541 CRADDP78560 199 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 HSF1Q00613 529 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 GPS1Q13098 491 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 KCNJ11Q14654 390 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 HKDC1Q2TB90 917 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 ACER2Q5QJU3 275 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms