RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CLDN8P56748 225 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 OCA2Q04671 838 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 KCNAB2Q13303 367 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 ACOX1Q15067 660 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 UGT8Q16880 541 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 ZNF773Q6PK81 442 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 CEP68Q76N32 757 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 PIWIL3Q7Z3Z3 882 aaKnown RBP14.29□□□□□ -0.12
DDX55-209ENST00000542286 R3HCC1LQ7Z5L2 792 aaKnown RBP14.29□□□□□ -0.12
DDX55-209ENST00000542286 SYT12Q8IV01 421 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 SH3KBP1Q96B97 665 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 MRGPRX3Q96LB0 322 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 RHNO1Q9BSD3 238 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 YTHDF1Q9BYJ9 559 aaKnown RBP14.29□□□□□ -0.12
DDX55-209ENST00000542286 LHPPQ9H008 270 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 SNX6Q9UNH7 406 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 DOCK9Q9BZ29 2069 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 MAGEB17A8MXT2 336 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 MYO1GB0I1T2 1018 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 PTGES3LE9PB15 166 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 VIPR2P41587 438 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 GZMMP51124 257 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 TPD52P55327 224 aaPredicted RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 MAD2L1Q13257 205 aaPredicted RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 DNASE1L3Q13609 305 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 HKDC1Q2TB90 917 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 THOC6Q86W42 341 aaKnown RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 RAVER1Q8IY67 606 aaKnown RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 C12orf76Q8N812 135 aaPredicted RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 MCOLN3Q8TDD5 553 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 PANX1Q96RD7 426 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDX55-209ENST00000542286 GFYI3L273 518 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 POLR2EP19388 210 aaKnown RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 TCEA1P23193 301 aaKnown RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 EPHA2P29317 976 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 SIM2Q14190 667 aaPredicted RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 CYP27C1Q4G0S4 372 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 SYTL3Q4VX76 610 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 AGAP7PQ5VUJ5 663 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 CNIH3Q8TBE1 160 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 NRBF2Q96F24 287 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 CPEB1Q9BZB8 566 aaKnown RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 GORASP2Q9H8Y8 452 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 HMG20AQ9NP66 347 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 DCAF13Q9NV06 445 aaKnown RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 THG1LQ9NWX6 298 aaKnown RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 GULP1Q9UBP9 304 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 PPIL1Q9Y3C6 166 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 DYTNA2CJ06 578 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 XPNPEP2O43895 674 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 TULP3O75386 442 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 ARHGEF15O94989 841 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 C7P10643 843 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 SYN1P17600 705 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 ENGP17813 658 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 TNFRSF1BP20333 461 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 CYP2A7P20853 494 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 XPAP23025 273 aaPredicted RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 DCTP40126 519 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 IFITM3Q01628 133 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 SELENBP1Q13228 472 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 SPCS2Q15005 226 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 CATSPEREQ5SY80 951 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 GTF2IRD2BQ6EKJ0 949 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 TMEM220Q6QAJ8 160 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 LRRC70Q7Z2Q7 622 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 GTF2IRD2Q86UP8 949 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 DHRS1Q96LJ7 313 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 DGCR6LQ9BY27 220 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 UGT2B28Q9BY64 529 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 SLC29A3Q9BZD2 475 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 FAM118AQ9NWS6 357 aa14.28□□□□□ -0.12
DDX55-209ENST00000542286 PCYT1BQ9Y5K3 369 aaPredicted RBP14.28□□□□□ -0.12
DDX55-209ENST00000542286 OTOL1A6NHN0 477 aaPredicted RBP14.27□□□□□ -0.12
DDX55-209ENST00000542286 FPGTO14772 594 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 ALOX5P09917 674 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 COX7A2P14406 83 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 MYOGP15173 224 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 ACPPP15309 386 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 JUNBP17275 347 aaPredicted RBP14.27□□□□□ -0.12
DDX55-209ENST00000542286 CEBPBP17676 345 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 TPTEP56180 551 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 GBX1Q14549 363 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 XAF1Q6GPH4 301 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 LAIR2Q6ISS4 152 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 AGTRAPQ6RW13 159 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 CCDC149Q6ZUS6 474 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 C1orf52Q8N6N3 182 aaKnown RBP14.27□□□□□ -0.12
DDX55-209ENST00000542286 GLB1L3Q8NCI6 653 aaPredicted RBP14.27□□□□□ -0.12
DDX55-209ENST00000542286 UBE2FQ969M7 185 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 NXPE3Q969Y0 559 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 TRPV5Q9NQA5 729 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 PLAGL1Q9UM63 463 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 ZNF451Q9Y4E5 1061 aa14.27□□□□□ -0.12
DDX55-209ENST00000542286 TCF20Q9UGU0 1960 aaKnown RBP14.27□□□□□ -0.13
DDX55-209ENST00000542286 C16orf96A6NNT2 1141 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 TIMP1P01033 207 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 C8GP07360 202 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 CBSLP0DN79 551 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms