RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 OR6T1Q8NGN1 323 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 RPLP0P6Q8NHW5 317 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 AFAP1L1Q8TED9 768 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 SSMEM1Q8WWF3 244 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 METTL21AQ8WXB1 218 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 POMGNT1Q8WZA1 660 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 PIGBQ92521 554 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 FRAT1Q92837 279 aaPredicted RBP0.45□□□□□ -2.34
COPB1-212ENST00000534771 SLCO4A1Q96BD0 722 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 PERPQ96FX8 193 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 SIGLEC12Q96PQ1 595 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 CDCA3Q99618 268 aaPredicted RBP0.45□□□□□ -2.34
COPB1-212ENST00000534771 CCDC3Q9BQI4 270 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 MXD3Q9BW11 206 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 DNAI2Q9GZS0 605 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 KCNK15Q9H427 330 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 MOB1AQ9H8S9 216 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 PATZ1Q9HBE1 687 aaKnown RBP0.45□□□□□ -2.34
COPB1-212ENST00000534771 GGA3Q9NZ52 723 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 HACD3Q9P035 362 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 KLK11Q9UBX7 282 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 NOL12Q9UGY1 213 aaKnown RBP eCLIP0.45□□□□□ -2.34
COPB1-212ENST00000534771 HACL1Q9UJ83 578 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 MRPL11Q9Y3B7 192 aaKnown RBP0.45□□□□□ -2.34
COPB1-212ENST00000534771 SPATA31D1Q6ZQQ2 1576 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 TNRQ92752 1358 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 SALL1Q9NSC2 1324 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 SHROOM4Q9ULL8 1493 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 IGKV1D-17A0A075B6S4 117 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 TRAV9-2A0A087WT02 112 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 ANKUB1A6NFN9 424 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 ZSCAN5CA6NGD5 496 aaPredicted RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 K7EQG2 157 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 ZNF749O43361 778 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 OR10H2O60403 315 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 CYTIPO60759 359 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 CA11O75493 328 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 RHBDL1O75783 438 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 TPPPO94811 219 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 IGLV1-47P01700 117 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 RPLP0P05388 317 aaKnown RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 RARGP13631 454 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 CPN1P15169 458 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 CDH2P19022 906 aaPredicted RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 PON1P27169 355 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 GPR183P32249 361 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 SPRP35270 261 aaPredicted RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 MDH2P40926 338 aaKnown RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 BRCC3P46736 316 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 TUBP50607 506 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 ALDH3A2P51648 485 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 IST1P53990 364 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 SIRPAP78324 504 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 MAT1AQ00266 395 aaKnown RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 TRAP1Q12931 704 aaKnown RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 SRSF9Q13242 221 aaKnown RBP eCLIP0.44□□□□□ -2.341e-11■■■■□ 22.6
COPB1-212ENST00000534771 MED22Q15528 200 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 MLF2Q15773 248 aaPredicted RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 DUSP5Q16690 384 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 TMEM266Q2M3C6 531 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 GPR33Q49SQ1 333 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 FGD3Q5JSP0 725 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 AGBL2Q5U5Z8 902 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 ACAD10Q6JQN1 1059 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 ZNF544Q6NX49 715 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 NCEH1Q6PIU2 408 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 TMCO3Q6UWJ1 677 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 CYP26C1Q6V0L0 522 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 CLEC17AQ6ZS10 378 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 SLC24A5Q71RS6 500 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 ARHGAP22Q7Z5H3 698 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 LDB1Q86U70 411 aaPredicted RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 LRP11Q86VZ4 500 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 CARM1Q86X55 608 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 OR4K1Q8NGD4 311 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 GTSF1Q8WW33 167 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 C11orf52Q96A22 123 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 LRRC59Q96AG4 307 aaKnown RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 NABP1Q96AH0 204 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 SIPA1Q96FS4 1042 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 SLC39A13Q96H72 371 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 RANBP9Q96S59 729 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 TBX15Q96SF7 602 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 MPHOSPH6Q99547 160 aaKnown RBP0.44□□□□□ -2.34
COPB1-212ENST00000534771 OLFM1Q99784 485 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 PAXXQ9BUH6 204 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 ZMYND12Q9H0C1 365 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 EGLN3Q9H6Z9 239 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 SH2D4AQ9H788 454 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 NTN4Q9HB63 628 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 Q9N2K0 584 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 PKD2L2Q9NZM6 624 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 SLC13A4Q9UKG4 626 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 TMED3Q9Y3Q3 217 aa0.44□□□□□ -2.34
COPB1-212ENST00000534771 NPHP3Q7Z494 1330 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 ARHGAP23Q9P227 1491 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 IGKV2D-24A0A075B6R9 120 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 hCG_38984A0A1B0GV85 526 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 A0A1W2PR77 199 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 FRMD3A2A2Y4 597 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms