RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ACAD11Q709F0 780 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 FGD2Q7Z6J4 655 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 KATNAL2Q8IYT4 538 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 CPSF7Q8N684 471 aaKnown RBP11.85□□□□□ -0.51
DDX41-215ENST00000512431 POGLUT1Q8NBL1 392 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 RMND5BQ96G75 393 aaPredicted RBP11.85□□□□□ -0.51
DDX41-215ENST00000512431 PLCD4Q9BRC7 762 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 LRRC40Q9H9A6 602 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 MMP25Q9NPA2 562 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 DLL4Q9NR61 685 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 SPATA7Q9P0W8 599 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 RPH3AQ9Y2J0 694 aaPredicted RBP11.85□□□□□ -0.51
DDX41-215ENST00000512431 ALG6Q9Y672 507 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 MROH6A6NGR9 719 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 IQCF5A8MTL0 148 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 H0YIG0 161 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 NDC80O14777 642 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 KPNA5O15131 536 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 FOXS1O43638 330 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 KLK8O60259 260 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 NME2P1O60361 137 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 C1orf105O95561 183 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 GAS8O95995 478 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 RBP3P10745 1247 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 NME2P22392 152 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 AOAHP28039 575 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 RPA3P35244 121 aaPredicted RBP11.84□□□□□ -0.51
DDX41-215ENST00000512431 PMPCAQ10713 525 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 PTK6Q13882 451 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 PARP6Q2NL67 630 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 PTRHD1Q6GMV3 140 aaKnown RBP11.84□□□□□ -0.51
DDX41-215ENST00000512431 AFTPHQ6ULP2 937 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 ANKRD37Q7Z713 158 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 LGI4Q8N135 537 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 MARVELD2Q8N4S9 558 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 GOT1L1Q8NHS2 421 aaPredicted RBP11.84□□□□□ -0.51
DDX41-215ENST00000512431 ACTL9Q8TC94 416 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 ALPK1Q96QP1 1244 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 PANX3Q96QZ0 392 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 LPAR4Q99677 370 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 CDCP1Q9H5V8 836 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 ANAPC5Q9UJX4 755 aa11.84□□□□□ -0.51
DDX41-215ENST00000512431 A0A1W2PPV9 198 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 KLRC4-KLRK1H3BQV0 150 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 PSMD3O43242 534 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 CTAG2O75638 210 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 CCNDBP1O95273 360 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 GOT2P00505 430 aaKnown RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 EZRP15311 586 aaKnown RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 PSMA3P25788 255 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 ADSLP30566 484 aaPredicted RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 BDKRB1P46663 353 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 CYB561P49447 251 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 MEOX1P50221 254 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 EFNA3P52797 238 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 ADAM8P78325 824 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 TSTA3Q13630 321 aaPredicted RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 ASTE1Q2TB18 679 aaPredicted RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 SKOR2Q2VWA4 1001 aaPredicted RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 CCSMST1Q4G0I0 132 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 FASTKD1Q53R41 847 aaKnown RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 AARS2Q5JTZ9 985 aaKnown RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 RNFT1Q5M7Z0 435 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 ARHGAP11AQ6P4F7 1023 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 PAPD4Q6PIY7 484 aaKnown RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 CAMKMTQ7Z624 323 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 RPS19BP1Q86WX3 136 aaKnown RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 CCDC71Q8IV32 467 aaPredicted RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 KRT222Q8N1A0 295 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 OR6P1Q8NGX9 317 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 OR4L1Q8NH43 312 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 LKAAEAR1Q8TD35 194 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 CCDC42Q96M95 316 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 OR2A5Q96R48 311 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 NPAS2Q99743 824 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 SLC6A16Q9GZN6 736 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 PIH1D1Q9NWS0 290 aaKnown RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 KLF13Q9Y2Y9 288 aaPredicted RBP11.83□□□□□ -0.52
DDX41-215ENST00000512431 NFS1Q9Y697 457 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 SPG11Q96JI7 2443 aa11.83□□□□□ -0.52
DDX41-215ENST00000512431 GOLGA6L22H0YM25 854 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 PROM1O43490 865 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 MAN1A2O60476 641 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 XCR1P46094 333 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 COPS2P61201 443 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 YBX1P67809 324 aaKnown RBP11.82□□□□□ -0.52
DDX41-215ENST00000512431 PRAMEP78395 509 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 NSDHLQ15738 373 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 CCDC38Q502W7 563 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 KCTD11Q693B1 232 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 PAOXQ6QHF9 649 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 Q71RC1 249 aaPredicted RBP11.82□□□□□ -0.52
DDX41-215ENST00000512431 OTOAQ7RTW8 1153 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 ADCK2Q7Z695 626 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 LINC00523Q86TU6 105 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 PAQR7Q86WK9 346 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 KLHDC8BQ8IXV7 354 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 ACRBPQ8NEB7 543 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 OR8K1Q8NGG5 319 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms