RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 TLX3O43711 291 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ATG13O75143 517 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 TIPRLO75663 272 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 CIB2O75838 187 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 OAZ2O95190 189 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZBTB11O95625 1053 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 DHFRP00374 187 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 AFPP02771 609 aaKnown RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 URODP06132 367 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 GLAP06280 429 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ASGR1P07306 291 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM90A15PP0C7V4 464 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM90A14PP0C7W9 464 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ICAM2P13598 275 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 PRG2P13727 222 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ANXA8P13928 327 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ENO3P13929 434 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 CCDC130P13994 396 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SELLP14151 372 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 PRF1P14222 555 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 UQCRBP14927 111 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 HOXB8P17481 243 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 HOXB9P17482 250 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 CDH2P19022 906 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 RAB3AP20336 220 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 PTPN4P29074 926 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SERPINB1P30740 379 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 NAMPTP43490 491 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 YAP1P46937 504 aaKnown RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 OR3A3P47888 321 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 MAPK12P53778 367 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ADPRHP54922 357 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 BEX3Q00994 111 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 FOLH1Q04609 750 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SGCGQ13326 291 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ALKBH1Q13686 389 aaKnown RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 RFTN1Q14699 578 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 HERC3Q15034 1050 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC39A14Q15043 492 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 OXA1LQ15070 435 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 HADHQ16836 314 aaKnown RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ANKRD20A4Q4UJ75 823 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ESCO2Q56NI9 601 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ALG10Q5BKT4 473 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ALG10BQ5I7T1 473 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 THEM4Q5T1C6 240 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ANXA8L1Q5VT79 327 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 GARNL3Q5VVW2 1013 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 PTRHD1Q6GMV3 140 aaKnown RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 PM20D1Q6GTS8 502 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SULT1C3Q6IMI6 304 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 PRR5LQ6MZQ0 368 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARSKQ6UWY0 536 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 IZUMO2Q6UXV1 221 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 LRRC6Q86X45 466 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 VSIG1Q86XK7 387 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 DENND6AQ8IWF6 608 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 CTAGE3PQ8IX95 158 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ADGRF3Q8IZF5 1079 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 MMP21Q8N119 569 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 KIF2BQ8N4N8 673 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 NIPA2Q8N8Q9 360 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARL14EPQ8N8R7 260 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 TC2NQ8N9U0 490 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 FNDC5Q8NAU1 212 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRPV1Q8NER1 839 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 CLHC1Q8NHS4 586 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF461Q8TAF7 563 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF420Q8TAQ5 688 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 PHOSPHO2Q8TCD6 241 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC2A12Q8TD20 617 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM216AQ8WUB2 273 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRIB2Q92519 343 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 KRT35Q92764 455 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 TANKQ92844 425 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ATP2A3Q93084 1043 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 RILPL2Q969X0 211 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC22A18Q96BI1 424 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC25A36Q96CQ1 311 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 EYA3Q99504 573 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 WDR83Q9BRX9 315 aaKnown RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 CCM2Q9BSQ5 444 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 C1orf50Q9BV19 199 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 GCOM2Q9BZD3 368 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 HOXD1Q9GZZ0 328 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SPRTNQ9H040 489 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 PPA2Q9H2U2 334 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 DHX33Q9H6R0 707 aaKnown RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 MRPL44Q9H9J2 332 aaKnown RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SIAEQ9HAT2 523 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 GDF3Q9NR23 364 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 RASSF1Q9NS23 344 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC38A7Q9NVC3 462 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 MCM9Q9NXL9 1143 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 TMEM9Q9P0T7 183 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 HMG20BQ9P0W2 317 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SRP68Q9UHB9 627 aaKnown RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 ENOPH1Q9UHY7 261 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 GLS2Q9UI32 602 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 DAPK2Q9UIK4 370 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms