RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 C4orf33Q8N1A6 199 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 KRT78Q8N1N4 520 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 ESAMQ96AP7 390 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 CLIP3Q96DZ5 547 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 CCDC126Q96EE4 140 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 CNTNAP3BQ96NU0 1288 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 OR2A5Q96R48 311 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 SMC6Q96SB8 1091 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 CNTNAP3Q9BZ76 1288 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 SPRTNQ9H040 489 aaPredicted RBP15.3■□□□□ 0.04
SSBP1-214ENST00000498107 MKS1Q9NXB0 559 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 SH2B3Q9UQQ2 575 aa15.3■□□□□ 0.04
SSBP1-214ENST00000498107 SDK2Q58EX2 2172 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 MDC1Q14676 2089 aaKnown RBP15.29■□□□□ 0.04
SSBP1-214ENST00000498107 TRBC2A0A5B9 178 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 FITM1A5D6W6 292 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 H0YGG7 62 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 ZNF749O43361 778 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 HCRTR1O43613 425 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 RAD1O60671 282 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 TIAF1O95411 115 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 NTRK1P04629 796 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 EIF2S1P05198 315 aaKnown RBP15.29■□□□□ 0.04
SSBP1-214ENST00000498107 C1GALT1C1LP0DN25 315 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 ATP5F1P24539 256 aaPredicted RBP15.29■□□□□ 0.04
SSBP1-214ENST00000498107 GSTM2P28161 218 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 AGTR2P50052 363 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 EMP3P54852 163 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 ARF3P61204 181 aaPredicted RBP15.29■□□□□ 0.04
SSBP1-214ENST00000498107 NFKB2Q00653 900 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 LAPTM5Q13571 262 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 HIST2H2ACQ16777 129 aaPredicted RBP15.29■□□□□ 0.04
SSBP1-214ENST00000498107 FBXO48Q5FWF7 155 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 PAGE2BQ5JRK9 111 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 CATSPEREQ5SY80 951 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 HIST2H2AA3Q6FI13 130 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 FRMPD2BQ6IN97 320 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 SLCO4C1Q6ZQN7 724 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 DTX1Q86Y01 620 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 CACNA2D3Q8IZS8 1091 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 CSNK1A1LQ8N752 337 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 MFSD9Q8NBP5 474 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 CAMKVQ8NCB2 501 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 TTLQ8NG68 377 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 RDH11Q8TC12 318 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 PROKR1Q8TCW9 393 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 PHF21BQ96EK2 531 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 PTCD3Q96EY7 689 aaKnown RBP15.29■□□□□ 0.04
SSBP1-214ENST00000498107 APOPT1Q96IL0 206 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 SEC16BQ96JE7 1060 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 PKNOX2Q96KN3 472 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 DPH2Q9BQC3 489 aaPredicted RBP15.29■□□□□ 0.04
SSBP1-214ENST00000498107 EFHD1Q9BUP0 239 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 EFCAB11Q9BUY7 163 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 CENPHQ9H3R5 247 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 TXLNGQ9NUQ3 528 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 PADI1Q9ULC6 663 aa15.29■□□□□ 0.04
SSBP1-214ENST00000498107 URB1O60287 2271 aaKnown RBP15.29■□□□□ 0.04
SSBP1-214ENST00000498107 LOC105369274A0A096LPK9 316 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 LOC102723532A0A0G2JNH3 316 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 H3BMH7 237 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 OR1F1O43749 312 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 NRP2O60462 931 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 ZNF28P17035 718 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 AGXTP21549 392 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 EEF1DP29692 281 aaKnown RBP15.28■□□□□ 0.04
SSBP1-214ENST00000498107 AHRP35869 848 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 EIF2S3P41091 472 aaKnown RBP15.28■□□□□ 0.04
SSBP1-214ENST00000498107 NAA20P61599 178 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 REEP5Q00765 189 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 IRF8Q02556 426 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 PCDH1Q08174 1060 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 ABHD18Q0P651 414 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 GTF2H2Q13888 395 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 CASP8Q14790 479 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 TBCCQ15814 346 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 XKR6Q5GH73 641 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 MANEAQ5SRI9 462 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 GARNL3Q5VVW2 1013 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 RHBDD2Q6NTF9 364 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 GTF2H2CQ6P1K8 395 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 C16orf46Q6P387 395 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 PLD3Q8IV08 490 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 OR4N4Q8N0Y3 316 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 TMEM151AQ8N4L1 468 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 IL22RA1Q8N6P7 574 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 TEX9Q8N6V9 391 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 CCDC63Q8NA47 563 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 GALNT6Q8NCL4 622 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 NKD1Q969G9 470 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 UBE2E3Q969T4 207 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 KIAA1143Q96AT1 154 aaPredicted RBP15.28■□□□□ 0.04
SSBP1-214ENST00000498107 WDR34Q96EX3 536 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 PGM2Q96G03 612 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 C17orf62Q9BQA9 187 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 FAM117AQ9C073 453 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 NT5DC2Q9H857 520 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 PCDHGA4Q9Y5G9 962 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 SEC16AO15027 2179 aa15.28■□□□□ 0.04
SSBP1-214ENST00000498107 HYKKA2RU49 373 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms