RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SLC24A5Q71RS6 500 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 PXKQ7Z7A4 578 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 RPAINQ86UA6 219 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 CEP57Q86XR8 500 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 LRRC49Q8IUZ0 686 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 OR4K1Q8NGD4 311 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 OR10Q1Q8NGQ4 319 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 METTL21AQ8WXB1 218 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 RFFLQ8WZ73 363 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 SYN2Q92777 582 aaPredicted RBP1.69□□□□□ -2.14
CCDC93-209ENST00000488908 C11orf52Q96A22 123 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 MS4A10Q96PG2 267 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 SCRT1Q9BWW7 348 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 DNAI2Q9GZS0 605 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 ZNF275Q9NSD4 429 aaPredicted RBP1.69□□□□□ -2.14
CCDC93-209ENST00000488908 PDP2Q9P2J9 529 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 RPS6KB2Q9UBS0 482 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 CLEC4EQ9ULY5 219 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 TRGV8A0A0C4DH27 118 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 C2CD4DB7Z1M9 353 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 IGHV2-70P01814 119 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 RPLP0P05388 317 aaKnown RBP1.68□□□□□ -2.14
CCDC93-209ENST00000488908 GPR183P32249 361 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 VAMP7P51809 220 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 ATP1A1-AS1Q5TC04 95 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 OR4A47Q6IF82 309 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 TMTC3Q6ZXV5 915 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 CARM1Q86X55 608 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 ENTHD1Q8IYW4 607 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 SLC22A15Q8IZD6 547 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 TCEANCQ8N8B7 351 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 RPLP0P6Q8NHW5 317 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 SFXN2Q96NB2 322 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 OLFM1Q99784 485 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 DEFB126Q9BYW3 111 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 VNN3Q9NY84 501 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 HACD3Q9P035 362 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 KLK11Q9UBX7 282 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 PLAGL1Q9UM63 463 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 MRPS18CQ9Y3D5 142 aaKnown RBP1.68□□□□□ -2.14
CCDC93-209ENST00000488908 FER1L5A0AVI2 2057 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 HIVEP2P31629 2446 aa1.68□□□□□ -2.14
CCDC93-209ENST00000488908 FEZF1A0PJY2 475 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 K7EQG2 157 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 RNF103O00237 685 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 TNFSF11O14788 317 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 ZNF749O43361 778 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 KBTBD11O94819 623 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 ODC1P11926 461 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 IRF2P14316 349 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 PPM1FP49593 454 aaPredicted RBP1.67□□□□□ -2.14
CCDC93-209ENST00000488908 NAAAQ02083 359 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 CKAP4Q07065 602 aaKnown RBP1.67□□□□□ -2.14
CCDC93-209ENST00000488908 CYLC2Q14093 348 aaPredicted RBP1.67□□□□□ -2.14
CCDC93-209ENST00000488908 LTB4RQ15722 352 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 SLC22A6Q4U2R8 563 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 RNASEH2BQ5TBB1 312 aaKnown RBP1.67□□□□□ -2.14
CCDC93-209ENST00000488908 IKBIPQ70UQ0 350 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 KIR2DL5BQ8NHK3 375 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 LINC01006Q8NI28 216 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 SCFD2Q8WU76 684 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 SLAMF9Q96A28 289 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 CDCA3Q99618 268 aaPredicted RBP1.67□□□□□ -2.14
CCDC93-209ENST00000488908 EGLN3Q9H6Z9 239 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 SAGE1Q9NXZ1 904 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 PADI2Q9Y2J8 665 aa1.67□□□□□ -2.14
CCDC93-209ENST00000488908 CYTIPO60759 359 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 ZNF253O75346 499 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 LAMP2P13473 410 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 ATP1A3P13637 1013 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 MFAP4P55083 255 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 MLF2Q15773 248 aaPredicted RBP1.66□□□□□ -2.14
CCDC93-209ENST00000488908 MCMDC2Q4G0Z9 681 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 FGD3Q5JSP0 725 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 TEX38Q6PEX7 206 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 NUP54Q7Z3B4 507 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 AACSQ86V21 672 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 WDTC1Q8N5D0 677 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 ZNF525Q8N782 197 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 PCYOX1LQ8NBM8 494 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 OR9Q2Q8NGE9 314 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 KCNE4Q8WWG9 221 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 PPP1R16AQ96I34 528 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 FAM71F1Q96KD3 344 aaPredicted RBP1.66□□□□□ -2.14
CCDC93-209ENST00000488908 MMP27Q9H306 513 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 IL1RAPQ9NPH3 570 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 RSPH14Q9UHP6 348 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 FBXO2Q9UK22 296 aaPredicted RBP1.66□□□□□ -2.14
CCDC93-209ENST00000488908 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
CCDC93-209ENST00000488908 NEMP2A6NFY4 417 aa1.65□□□□□ -2.15
CCDC93-209ENST00000488908 PEX14O75381 377 aa1.65□□□□□ -2.15
CCDC93-209ENST00000488908 LYPD3O95274 346 aa1.65□□□□□ -2.15
CCDC93-209ENST00000488908 MDKP21741 143 aaPredicted RBP1.65□□□□□ -2.15
CCDC93-209ENST00000488908 ARL3P36405 182 aa1.65□□□□□ -2.15
CCDC93-209ENST00000488908 SLC1A4P43007 532 aa1.65□□□□□ -2.15
CCDC93-209ENST00000488908 WNT4P56705 351 aa1.65□□□□□ -2.15
CCDC93-209ENST00000488908 ERVPABLB-1P60509 514 aa1.65□□□□□ -2.15
CCDC93-209ENST00000488908 TEFQ10587 303 aa1.65□□□□□ -2.15
CCDC93-209ENST00000488908 OPCMLQ14982 345 aa1.65□□□□□ -2.15
CCDC93-209ENST00000488908 SHHQ15465 462 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms