RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 GPR26Q8NDV2 337 aa11.98□□□□□ -0.49
USP11-206ENST00000469080 OR13F1Q8NGS4 319 aa11.98□□□□□ -0.49
USP11-206ENST00000469080 MAGEE2Q8TD90 523 aaPredicted RBP11.98□□□□□ -0.49
USP11-206ENST00000469080 FUBP1Q96AE4 644 aaKnown RBP11.98□□□□□ -0.49
USP11-206ENST00000469080 TRIM43Q96BQ3 446 aaPredicted RBP11.98□□□□□ -0.49
USP11-206ENST00000469080 CEP19Q96LK0 163 aa11.98□□□□□ -0.49
USP11-206ENST00000469080 SPAG4Q9NPE6 437 aa11.98□□□□□ -0.49
USP11-206ENST00000469080 IFT80Q9P2H3 777 aaPredicted RBP11.98□□□□□ -0.49
USP11-206ENST00000469080 TMEM5Q9Y2B1 443 aa11.98□□□□□ -0.49
USP11-206ENST00000469080 PDCD11Q14690 1871 aaKnown RBP11.97□□□□□ -0.49
USP11-206ENST00000469080 PITPNM1O00562 1244 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 NUPL2O15504 423 aaKnown RBP11.97□□□□□ -0.49
USP11-206ENST00000469080 ZNF682O95780 498 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 BPIP17213 487 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 LAG3P18627 525 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 MAT2AP31153 395 aaKnown RBP11.97□□□□□ -0.49
USP11-206ENST00000469080 POLR2IP36954 125 aaKnown RBP11.97□□□□□ -0.49
USP11-206ENST00000469080 RING1Q06587 406 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 MAPRE2Q15555 327 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 DGUOKQ16854 277 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 Q5BKY6 102 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 TCEAL5Q5H9L2 206 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 ALKBH2Q6NS38 261 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 TMPRSS9Q7Z410 1059 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 FAM124AQ86V42 546 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 SLC39A11Q8N1S5 342 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 TMEM151AQ8N4L1 468 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 TESCQ96BS2 214 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 PLD4Q96BZ4 506 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 MGME1Q9BQP7 344 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 KLF16Q9BXK1 252 aaPredicted RBP11.97□□□□□ -0.49
USP11-206ENST00000469080 BRD9Q9H8M2 597 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 LIN7BQ9HAP6 207 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 CACNA2D2Q9NY47 1150 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 GLTPQ9NZD2 209 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 CNOT11Q9UKZ1 510 aaKnown RBP11.97□□□□□ -0.49
USP11-206ENST00000469080 ZNF490Q9ULM2 529 aaPredicted RBP11.97□□□□□ -0.49
USP11-206ENST00000469080 SLC22A14Q9Y267 594 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 LOC730098B7Z3J9 87 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 PLD2O14939 933 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 HSMCR30P0CW71 290 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 CAPN3P20807 821 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 CYP4F2P78329 520 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 MERTKQ12866 999 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 TARDBPQ13148 414 aaKnown RBP eCLIP11.97□□□□□ -0.49
USP11-206ENST00000469080 C21orf62-AS1Q17RA5 79 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 COLEC12Q5KU26 742 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 LETMD1Q6P1Q0 360 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 KRTCAP2Q8N6L1 136 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 EID2BQ96D98 161 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 ZBTB18Q99592 522 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 FUNDC2Q9BWH2 189 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 UCK2Q9BZX2 261 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 DPY30Q9C005 99 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 DIABLOQ9NR28 239 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 NLE1Q9NVX2 485 aaPredicted RBP11.97□□□□□ -0.49
USP11-206ENST00000469080 DUS2Q9NX74 493 aaKnown RBP11.97□□□□□ -0.49
USP11-206ENST00000469080 SH3BP4Q9P0V3 963 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 PRPF19Q9UMS4 504 aaKnown RBP11.97□□□□□ -0.49
USP11-206ENST00000469080 MIA3Q5JRA6 1907 aa11.97□□□□□ -0.49
USP11-206ENST00000469080 RAB19A4D1S5 217 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 HNRNPCL2B2RXH8 293 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 PI15O43692 258 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 ULK1O75385 1050 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 YES1P07947 543 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 RHOP08100 348 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 MSH3P20585 1137 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 LBX1P52954 281 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 GRSF1Q12849 480 aaKnown RBP eCLIP11.96□□□□□ -0.49
USP11-206ENST00000469080 GTF2H2Q13888 395 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 SQLEQ14534 574 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 GRM7Q14831 915 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 NHSL2Q5HYW2 709 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 GTF2H2CQ6P1K8 395 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 SYCE2Q6PIF2 218 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 GLB1L3Q8NCI6 653 aaPredicted RBP11.96□□□□□ -0.49
USP11-206ENST00000469080 OR2AP1Q8NGE2 309 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 TTC9Q92623 222 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 NXPE3Q969Y0 559 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 RNF31Q96EP0 1072 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 ZSWIM3Q96MP5 696 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 TRIM54Q9BYV2 358 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 LIMD1Q9UGP4 676 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 PLAGL1Q9UM63 463 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 A0A1W2PRG6 482 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 OR5K3A6NET4 321 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 TMEM189-UBE2V1I3L0A0 370 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 YKT6O15498 198 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 LEFTY1O75610 366 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 DGKEP52429 567 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 METAP1P53582 386 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 SEC13P55735 322 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 UAP1L1Q3KQV9 507 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 CATSPEREQ5SY80 951 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 STEAP3Q658P3 488 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 USP45Q70EL2 814 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 C16orf62Q7Z3J2 963 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 RETREG3Q86VR2 466 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 RIOK2Q9BVS4 552 aaKnown RBP11.96□□□□□ -0.49
USP11-206ENST00000469080 MBD1Q9UIS9 605 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms