RNA–Protein interactions for RNA: ENST00000453121.1

NEGR1-IT1-201, NEGR1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene NEGR1-IT1, Length 534 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEGR1-IT1-201ENST00000453121 ATP1A1P05023 1023 aaKnown RBP3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 TRIM49P0CI25 452 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 TRIM49CP0CI26 452 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ACTN1P12814 892 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 PRLRP16471 622 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 CAPN3P20807 821 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 KCNA5P22460 613 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ACADLP28330 430 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 PPARGP37231 505 aaPredicted RBP3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 RXRGP48443 463 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 CASP4P49662 377 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 VAMP7P51809 220 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 PEX3P56589 373 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 GTF2BQ00403 316 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ROR1Q01973 937 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 PRKCEQ02156 737 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 GFPT1Q06210 699 aaPredicted RBP3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 RUNX1T1Q06455 604 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ENPEPQ07075 957 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 PPIL2Q13356 520 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 TMED1Q13445 227 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ZNF234Q14588 700 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 STXBP2Q15833 593 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ASTE1Q2TB18 679 aaPredicted RBP3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 MYLK3Q32MK0 819 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 KRTCAP3Q53RY4 240 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 C9orf50Q5SZB4 431 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 MFSD4BQ5TF39 518 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 PLA2G4FQ68DD2 849 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 JADE1Q6IE81 842 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ZNF449Q6P9G9 518 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 Q6ZTC4 211 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 USP50Q70EL3 339 aaPredicted RBP3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 HAUS6Q7Z4H7 955 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ERO1BQ86YB8 467 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 MAP7D3Q8IWC1 876 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 DAW1Q8N136 415 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 KRT222Q8N1A0 295 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 RASGEF1CQ8N431 466 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 WDTC1Q8N5D0 677 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 IL17RCQ8NAC3 791 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 OR13A1Q8NGR1 328 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 SPATA3Q8NHX4 192 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 POMGNT1Q8WZA1 660 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 TBC1D31Q96DN5 1066 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ELMOD3Q96FG2 381 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 CEP170P1Q96L14 293 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 FAM81BQ96LP2 452 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 CMTM3Q96MX0 182 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 NODALQ96S42 347 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ABCG4Q9H172 646 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 POLR3FQ9H1D9 316 aaPredicted RBP3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ZNF302Q9NR11 478 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 SEPT11Q9NVA2 429 aaKnown RBP3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 SETD4Q9NVD3 440 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 UBA2Q9UBT2 640 aaPredicted RBP3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 FBXW11Q9UKB1 542 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 SNX12Q9UMY4 172 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 AGTPBP1Q9UPW5 1226 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 DLGAP4Q9Y2H0 992 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 RIPK3Q9Y572 518 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 LYVE1Q9Y5Y7 322 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ZNF236Q9UL36 1845 aa3.79□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ZNFX1Q9P2E3 1918 aaKnown RBP3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 A0A087X0T9 212 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 A0A1W2PP11 408 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 KANSL1LA0AUZ9 987 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 FAM170AA1A519 330 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 TMEM150BA6NC51 233 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 EIF4E1BA6NMX2 242 aaKnown RBP3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 A8MZ25 164 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 MYO1GB0I1T2 1018 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 F8VZ95 297 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 C16orf97H3BN30 126 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 SLC16A4O15374 487 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ZNHIT1O43257 154 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 LMX1BO60663 402 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 PTP4A3O75365 173 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 PALMO75781 387 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 OR2C1O95371 312 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 H2AFZP0C0S5 128 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 RHOXF2BP0C7M4 288 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 FAM228BP0C875 321 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ACADMP11310 421 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 HOXD10P28358 340 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 NAMPTP43490 491 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 SNX16P57768 344 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 EEF1A1P68104 462 aaKnown RBP3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 PRAMEP78395 509 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 COG7P83436 770 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 SP4Q02446 784 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 ACSM2AQ08AH3 577 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 PDE1CQ14123 709 aaPredicted RBP3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 EMC2Q15006 297 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 CBWD6Q4V339 395 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 EPC2Q52LR7 807 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 TMEM35AQ53FP2 167 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 XKR3Q5GH77 459 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 CBWD3Q5JTY5 395 aa3.78□□□□□ -1.8
NEGR1-IT1-201ENST00000453121 EEF1A1P5Q5VTE0 462 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms