RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ACSS2Q9NR19 701 aa19.36■□□□□ 0.69
GTF3A-202ENST00000419181 DMGDHQ9UI17 866 aaKnown RBP19.36■□□□□ 0.69
GTF3A-202ENST00000419181 NXT1Q9UKK6 140 aaKnown RBP19.36■□□□□ 0.69
GTF3A-202ENST00000419181 MAU2Q9Y6X3 613 aa19.36■□□□□ 0.69
GTF3A-202ENST00000419181 NUP210LQ5VU65 1888 aa19.36■□□□□ 0.69
GTF3A-202ENST00000419181 CTAGE15A4D2H0 777 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 K7EM74 188 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 TXNDC9O14530 226 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 CTAGE8P0CG41 777 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 CDH1P12830 882 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 RPS15AP62244 130 aaKnown RBP19.35■□□□□ 0.69
GTF3A-202ENST00000419181 CDKL1Q00532 357 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 USP10Q14694 798 aaKnown RBP19.35■□□□□ 0.69
GTF3A-202ENST00000419181 TSNQ15631 228 aaKnown RBP19.35■□□□□ 0.69
GTF3A-202ENST00000419181 ZKSCAN8Q15776 578 aaPredicted RBP19.35■□□□□ 0.69
GTF3A-202ENST00000419181 VN1R4Q7Z5H5 301 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 PPP1R32Q7Z5V6 425 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 ADAMTSL2Q86TH1 951 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 CTAGE6Q86UF2 777 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 CTAGE4Q8IX94 777 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 PPM1NQ8N819 430 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 OR4K3Q96R72 315 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 FAM129AQ9BZQ8 928 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 DERL2Q9GZP9 239 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 CTNNAL1Q9UBT7 734 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 OARD1Q9Y530 152 aa19.35■□□□□ 0.69
GTF3A-202ENST00000419181 PCDHGA9Q9Y5G4 932 aaKnown RBP19.35■□□□□ 0.69
GTF3A-202ENST00000419181 VSTM2BA6NLU5 285 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 PHGDHO43175 533 aaKnown RBP19.34■□□□□ 0.69
GTF3A-202ENST00000419181 SUV39H1O43463 412 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 CEACAM4O75871 244 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 STMN1P16949 149 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 NR1D1P20393 614 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 SPRP35270 261 aaPredicted RBP19.34■□□□□ 0.69
GTF3A-202ENST00000419181 CCL11P51671 97 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 RRADP55042 308 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 NAB1Q13506 487 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 GRTP1Q5TC63 336 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 PTRH1Q86Y79 214 aaKnown RBP19.34■□□□□ 0.69
GTF3A-202ENST00000419181 ABHD11Q8NFV4 315 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 KIF18AQ8NI77 898 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 COL26A1Q96A83 441 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 NACC2Q96BF6 587 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 THAP11Q96EK4 314 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 MLXIPLQ9NP71 852 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 CDC14AQ9UNH5 594 aa19.34■□□□□ 0.69
GTF3A-202ENST00000419181 IGLV3-12A0A075B6K2 115 aa19.33■□□□□ 0.68
GTF3A-202ENST00000419181 PYCARD-AS1I3L0S3 204 aa19.33■□□□□ 0.68
GTF3A-202ENST00000419181 FOXS1O43638 330 aa19.33■□□□□ 0.68
GTF3A-202ENST00000419181 FAM155BO75949 473 aa19.33■□□□□ 0.68
GTF3A-202ENST00000419181 PDGFAP04085 211 aa19.33■□□□□ 0.68
GTF3A-202ENST00000419181 MMP11P24347 488 aa19.33■□□□□ 0.68
GTF3A-202ENST00000419181 BCL6P41182 706 aa19.33■□□□□ 0.68
GTF3A-202ENST00000419181 DSG2Q14126 1118 aa19.33■□□□□ 0.68
GTF3A-202ENST00000419181 EFTUD2Q15029 972 aaKnown RBP eCLIP19.33■□□□□ 0.68
GTF3A-202ENST00000419181 GLE1Q53GS7 698 aaKnown RBP19.33■□□□□ 0.68
GTF3A-202ENST00000419181 TRIM44Q96DX7 344 aaPredicted RBP19.33■□□□□ 0.68
GTF3A-202ENST00000419181 DRC3Q9H069 523 aa19.33■□□□□ 0.68
GTF3A-202ENST00000419181 P4HTMQ9NXG6 502 aa19.33■□□□□ 0.68
GTF3A-202ENST00000419181 ZNF282Q9UDV7 671 aaPredicted RBP19.33■□□□□ 0.68
GTF3A-202ENST00000419181 TNRC6AQ8NDV7 1962 aaKnown RBP19.33■□□□□ 0.68
GTF3A-202ENST00000419181 FEZF1A0PJY2 475 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 ANXA5P08758 320 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 CCDC166P0CW27 439 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 FBLP22087 321 aaKnown RBP19.32■□□□□ 0.68
GTF3A-202ENST00000419181 HNMTP50135 292 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 CCR8P51685 355 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 RAB10P61026 200 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 SNRPNP63162 240 aaKnown RBP19.32■□□□□ 0.68
GTF3A-202ENST00000419181 FAM53BQ14153 422 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 DCAF10Q5QP82 559 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 ATG14Q6ZNE5 492 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 SHISA6Q6ZSJ9 500 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 ASB18Q6ZVZ8 466 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 FRA10AC1Q70Z53 315 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 RELL1Q8IUW5 271 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 SPATA6LQ8N4H0 392 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 AMER3Q8N944 861 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 OR4K1Q8NGD4 311 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 STT3BQ8TCJ2 826 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 NEIL2Q969S2 332 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 TM4SF19Q96DZ7 209 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 UBXN10Q96LJ8 280 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 FER1L6-AS2Q96M78 137 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 SLC25A23Q9BV35 468 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 SARGQ9BW04 601 aa19.32■□□□□ 0.68
GTF3A-202ENST00000419181 UNKQ9C0B0 810 aaKnown RBP19.32■□□□□ 0.68
GTF3A-202ENST00000419181 SOX17Q9H6I2 414 aaPredicted RBP19.32■□□□□ 0.68
GTF3A-202ENST00000419181 MTRF1LQ9UGC7 380 aaKnown RBP19.32■□□□□ 0.68
GTF3A-202ENST00000419181 MRPS2Q9Y399 296 aaKnown RBP19.32■□□□□ 0.68
GTF3A-202ENST00000419181 PEX12O00623 359 aa19.31■□□□□ 0.68
GTF3A-202ENST00000419181 PRPF4O43172 522 aaKnown RBP eCLIP19.31■□□□□ 0.68
GTF3A-202ENST00000419181 LCMT2O60294 686 aaKnown RBP19.31■□□□□ 0.68
GTF3A-202ENST00000419181 ZIC2O95409 532 aaPredicted RBP19.31■□□□□ 0.68
GTF3A-202ENST00000419181 IGHEP01854 428 aa19.31■□□□□ 0.68
GTF3A-202ENST00000419181 STATHP02808 62 aa19.31■□□□□ 0.68
GTF3A-202ENST00000419181 GRK3P35626 688 aa19.31■□□□□ 0.68
GTF3A-202ENST00000419181 SLC26A3P40879 764 aa19.31■□□□□ 0.68
GTF3A-202ENST00000419181 OCA2Q04671 838 aa19.31■□□□□ 0.68
GTF3A-202ENST00000419181 NDUFA9Q16795 377 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms