RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 DOT1LQ8TEK3 1739 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 NFAT5O94916 1531 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 N4BP2Q86UW6 1770 aaPredicted RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 J3KR12 359 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 IL6P05231 212 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 ASPAP45381 313 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 OASLQ15646 514 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 TRMT5Q32P41 509 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 FAM98BQ52LJ0 330 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 ZNF549Q6P9A3 640 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 C12orf56Q8IXR9 622 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 CPNE9Q8IYJ1 553 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 GATSQ8NAP1 163 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 ASB16Q96NS5 453 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 IPPKQ9H8X2 491 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 ZNF355PQ9NSJ1 428 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 C4AP0C0L4 1744 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 A0A1W2PRG6 482 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 CFAP73A6NFT4 308 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 VSTM2BA6NLU5 285 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 PIRO00625 290 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 SEC31AO94979 1220 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 TARSP26639 723 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 SLC5A2P31639 672 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 CLK1P49759 484 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 SSR4P51571 173 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 RPL7AP62424 266 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 PPP3R1P63098 170 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 VLDLRP98155 873 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 PCDH1Q08174 1060 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 IL20RBQ6UXL0 311 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 ASB18Q6ZVZ8 466 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 PTCD2Q8WV60 388 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 SLC5A11Q8WWX8 675 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 SLC39A7Q92504 469 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 RBP7Q96R05 134 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 TMEM121BQ9BXQ6 578 aaPredicted RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 EBPLQ9BY08 206 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 FAM192AQ9GZU8 254 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 EFCAB1Q9HAE3 211 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 ACTR10Q9NZ32 417 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 CCDC162PA2VCL2 907 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 ANKRD66B4E2M5 251 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 H7BY64 318 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 ALOX15BO15296 676 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 SERPINB1P30740 379 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 GTF2H2Q13888 395 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 COL9A2Q14055 689 aaPredicted RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 DOC2AQ14183 400 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 GTF2H2CQ6P1K8 395 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 TMEM53Q6P2H8 277 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 FAM71AQ8IYT1 594 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 ARL10Q8N8L6 244 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 MFSD2AQ8NA29 543 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 OR8S1Q8NH09 359 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 FGF11Q92914 225 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 TRMT61AQ96FX7 289 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 PRAP1Q96NZ9 151 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 PHF12Q96QT6 1004 aa8.92□□□□□ -0.98
LIMCH1-202ENST00000381753 MYOCOSA0A1B0GUC4 107 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 E2F3O00716 465 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 MYL12BO14950 172 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 HCRTO43612 131 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 CDH1P12830 882 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 ETS1P14921 441 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 MNX1P50219 401 aaPredicted RBP8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 OGDHQ02218 1023 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 RING1Q06587 406 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 SLC10A7Q0GE19 358 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 PTPRCAPQ14761 206 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 PTCHD3Q3KNS1 767 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 LRIT3Q3SXY7 679 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 GCNT7Q6ZNI0 430 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 KIF18BQ86Y91 864 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 PPP1R14BQ96C90 147 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 MFSD3Q96ES6 412 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 OR52E6Q96RD3 313 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 CCT8L2Q96SF2 557 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 TCF12Q99081 682 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 DPH7Q9BTV6 452 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 C6orf106Q9H6K1 298 aaPredicted RBP8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 REEP1Q9H902 201 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 SP140LQ9H930 580 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 PRDM6Q9NQX0 595 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 SACM1LQ9NTJ5 587 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 HMGXB4Q9UGU5 601 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 CNOT6Q9ULM6 557 aaKnown RBP8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 SNX12Q9UMY4 172 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 AKAP12Q02952 1782 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 AREL1O15033 823 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 ZFAND5O76080 213 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 LCKP06239 509 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 RAD52P43351 418 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 MLLT6P55198 1093 aaPredicted RBP8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 ITIH4Q14624 930 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 WASHC2DQ5SRD0 308 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 YTHDF3Q7Z739 585 aaKnown RBP8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 TRIM73Q86UV7 250 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 OR4K14Q8NGD5 310 aa8.91□□□□□ -0.98
LIMCH1-202ENST00000381753 FAM110BQ8TC76 370 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms