RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ZC3H7BQ9UGR2 993 aaKnown RBP11.31□□□□□ -0.6
GABPB1-206ENST00000543881 CDC23Q9UJX2 597 aa11.31□□□□□ -0.6
GABPB1-206ENST00000543881 HIVEP1P15822 2718 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 PKDREJQ9NTG1 2253 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 SETD2Q9BYW2 2564 aaPredicted RBP11.3□□□□□ -0.6
GABPB1-206ENST00000543881 SDR42E2A6NKP2 422 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 PFDN6O15212 129 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 KIF5CO60282 957 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 USP1O94782 785 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 EIF2S1P05198 315 aaKnown RBP11.3□□□□□ -0.6
GABPB1-206ENST00000543881 SNRPB2P08579 225 aaKnown RBP11.3□□□□□ -0.6
GABPB1-206ENST00000543881 PIM1P11309 404 aaPredicted RBP11.3□□□□□ -0.6
GABPB1-206ENST00000543881 MLNP12872 115 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 PAMP19021 973 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 MAGEA3P43357 314 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 CUL1Q13616 776 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 PRTGQ2VWP7 1150 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 FAM214AQ32MH5 1076 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 CCDC137Q6PK04 289 aaKnown RBP11.3□□□□□ -0.6
GABPB1-206ENST00000543881 REXO1L1PQ8IX06 675 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 BCORP1Q8N888 145 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 PPFIBP2Q8ND30 876 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 MCUQ8NE86 351 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 ZFYVE21Q9BQ24 234 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 CHST11Q9NPF2 352 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 INTS10Q9NVR2 710 aaKnown RBP11.3□□□□□ -0.6
GABPB1-206ENST00000543881 SAMD15Q9P1V8 674 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 JRKLQ9Y4A0 524 aa11.3□□□□□ -0.6
GABPB1-206ENST00000543881 MAGEB16A2A368 324 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 E5RI56 91 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 H0YGG7 62 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 SLC16A8O95907 504 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 COX6B1P14854 86 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 CMPK1P30085 196 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 SLC1A2P43004 574 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 PNLIPRP1P54315 467 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 KCNK10P57789 538 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 ARF3P61204 181 aaPredicted RBP11.29□□□□□ -0.6
GABPB1-206ENST00000543881 Q0VFX4 171 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 ZNF324BQ6AW86 544 aaPredicted RBP11.29□□□□□ -0.6
GABPB1-206ENST00000543881 ZNF425Q6IV72 752 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 RPUSD3Q6P087 351 aaKnown RBP11.29□□□□□ -0.6
GABPB1-206ENST00000543881 CYHR1Q6ZMK1 362 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 BNC2Q6ZN30 1099 aaPredicted RBP11.29□□□□□ -0.6
GABPB1-206ENST00000543881 PAQR7Q86WK9 346 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 NAT8LQ8N9F0 302 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 CATSPER1Q8NEC5 780 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 OR11G2Q8NGC1 345 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 STT3BQ8TCJ2 826 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 ZNF480Q8WV37 535 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 SMPDL3AQ92484 453 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 PBKQ96KB5 322 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 SIGLEC10Q96LC7 697 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 PLCD4Q9BRC7 762 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 LHPPQ9H008 270 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 XAB2Q9HCS7 855 aaKnown RBP11.29□□□□□ -0.6
GABPB1-206ENST00000543881 ZNF304Q9HCX3 659 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 MRPS30Q9NP92 439 aaKnown RBP11.29□□□□□ -0.6
GABPB1-206ENST00000543881 FAM169AQ9Y6X4 670 aa11.29□□□□□ -0.6
GABPB1-206ENST00000543881 ZFHX3Q15911 3703 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 CTAGE9A4FU28 777 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 E7ENX8 843 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 PCDH17O14917 1159 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 HAUS5O94927 633 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 CATP04040 527 aaKnown RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 ZGLP1P0C6A0 271 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 HTR1EP28566 365 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 RPA3P35244 121 aaPredicted RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 SNRPNP63162 240 aaKnown RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 MPP1Q00013 466 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 TAP2Q03519 686 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 KLC1Q07866 573 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 TSTA3Q13630 321 aaPredicted RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 THOC5Q13769 683 aaKnown RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 ARHGAP19Q14CB8 494 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 ZNF630Q2M218 657 aaPredicted RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 HKDC1Q2TB90 917 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 KRTAP21-3Q3LHN1 58 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 VWA2Q5GFL6 755 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 LINC00696Q6ZRV3 163 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 NEK10Q6ZWH5 1172 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 MRGPRGQ86SM5 289 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 LRRC56Q8IYG6 542 aaPredicted RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 PRSS58Q8IYP2 241 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 ARHGEF39Q8N4T4 335 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 ASB11Q8WXH4 323 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 THOC3Q96J01 351 aaKnown RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 MAGEB10Q96LZ2 347 aaPredicted RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 TRIM8Q9BZR9 551 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 FAM114A2Q9NRY5 505 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 SEMA3GQ9NS98 782 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 C20orf96Q9NUD7 363 aaPredicted RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 SUCOQ9UBS9 1254 aaKnown RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 TAC3Q9UHF0 121 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 NXT1Q9UKK6 140 aaKnown RBP11.28□□□□□ -0.6
GABPB1-206ENST00000543881 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 DHRS7Q9Y394 339 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 DCHS2Q6V1P9 2916 aa11.28□□□□□ -0.6
GABPB1-206ENST00000543881 HEATR5BQ9P2D3 2071 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms