RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 APLFQ8IW19 511 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 DENND6AQ8IWF6 608 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 FAM26EQ8N5C1 309 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 LILRA3Q8N6C8 439 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 AVL9Q8NBF6 648 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 ZBTB34Q8NCN2 500 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 FAM156AQ8NDB6 213 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 FBXO36Q8NEA4 188 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 FBXO25Q8TCJ0 367 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 HM13Q8TCT9 377 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 CALML6Q8TD86 181 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 LPGAT1Q92604 370 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 NCLNQ969V3 563 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 SGK3Q96BR1 496 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 INSM2Q96T92 566 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 SLC38A3Q99624 504 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 BARD1Q99728 777 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 SCNM1Q9BWG6 230 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 OR52A5Q9H2C5 316 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 CLEC4MQ9H2X3 399 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 LRRN3Q9H3W5 708 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 EHD1Q9H4M9 534 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 ZNF395Q9H8N7 513 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 COG4Q9H9E3 785 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 L2HGDHQ9H9P8 463 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 UCK1Q9HA47 277 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 SCPEP1Q9HB40 452 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 EPB41L5Q9HCM4 733 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 SLC40A1Q9NP59 571 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 ATAD3AQ9NVI7 634 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 INTS10Q9NVR2 710 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 HPF1Q9NWY4 346 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 TMCO1Q9UM00 188 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 PSMD13Q9UNM6 376 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 CHMP2BQ9UQN3 213 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 CFL2Q9Y281 166 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 CRYL1Q9Y2S2 319 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 PCDHB1Q9Y5F3 818 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 ARHGEF17Q96PE2 2063 aaPredicted RBP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 IGHV1OR21-1A0A087WYE8 117 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 PRAMEF33A0A0G2JMD5 474 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 UBA6A0AVT1 1052 aaPredicted RBP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 ARHGAP10A1A4S6 786 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 OR6C65A6NJZ3 312 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 OR52A4PA6NMU1 304 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 H3BMM5 538 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 UBXN8O00124 270 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 EBAG9O00559 213 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 KPNA5O15131 536 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 TBX1O43435 398 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 GPC4O75487 556 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 SLCO2B1O94956 709 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CNOT4O95628 575 aaKnown RBP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 B3GALT4O96024 378 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 MT-CO3P00414 261 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 AHSGP02765 367 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 ESR1P03372 595 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 PKMP14618 531 aaKnown RBP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 SPINK2P20155 84 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 ALAS2P22557 587 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 AOAHP28039 575 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 ACADLP28330 430 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 GABRB3P28472 473 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CD1CP29017 333 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 FMO4P31512 558 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 SOX6P35712 828 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 LEPRP48357 1165 aaKnown RBP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CARSP49589 748 aaKnown RBP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 ARHGDIBP52566 201 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CLDN6P56747 220 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 MPP1Q00013 466 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 TARDBPQ13148 414 aaKnown RBP eCLIP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CTSL3PQ5NE16 218 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 HES3Q5TGS1 186 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 AADACL4Q5VUY2 407 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 ZNF470Q6ECI4 717 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 PTRHD1Q6GMV3 140 aaKnown RBP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 NAPRTQ6XQN6 538 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CCNI2Q6ZMN8 369 aaPredicted RBP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 C3orf62Q6ZUJ4 267 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 TMEM26Q6ZUK4 368 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 PLEKHM3Q6ZWE6 761 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 SPRED1Q7Z699 444 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 EPHX4Q8IUS5 362 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CNTN4Q8IWV2 1026 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 PALM2Q8IXS6 379 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 ZBED8Q8IZ13 594 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 DCBLD1Q8N8Z6 715 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 Q8N9G6 341 aaPredicted RBP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CLRN3Q8NCR9 226 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 C2CD4AQ8NCU7 369 aaPredicted RBP6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 IL17RDQ8NFM7 739 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 PYROXD1Q8WU10 500 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 ASZ1Q8WWH4 475 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 ELMO1Q92556 727 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CXorf40BQ96DE9 158 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CERS2Q96G23 380 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 CABS1Q96KC9 395 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 C12orf66Q96MD2 445 aa6.09□□□□□ -1.44
ATPAF1-209ENST00000529214 PANX3Q96QZ0 392 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms