RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 TMPRSS11BQ86T26 416 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 CACNA2D3Q8IZS8 1091 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 NLGN4XQ8N0W4 816 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 MREGQ8N565 214 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 DTWD1Q8N5C7 304 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 NLGN4YQ8NFZ3 816 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-224ENST00000523873 HNRNPLLQ8WVV9 542 aaKnown RBP12.28□□□□□ -0.44
VEGFA-224ENST00000523873 SLC5A11Q8WWX8 675 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 NEIL2Q969S2 332 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 CRELD1Q96HD1 420 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 RUFY1Q96T51 708 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 SELENOSQ9BQE4 189 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 HAUS8Q9BT25 410 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 PCBD2Q9H0N5 130 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 ACTR5Q9H9F9 607 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-224ENST00000523873 TMEM184CQ9NVA4 438 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 ANKMY1Q9P2S6 941 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 XPR1Q9UBH6 696 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 PTBP2Q9UKA9 531 aaKnown RBP12.28□□□□□ -0.44
VEGFA-224ENST00000523873 SNX7Q9UNH6 387 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 DYRK1BQ9Y463 629 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 ACACBO00763 2458 aa12.28□□□□□ -0.44
VEGFA-224ENST00000523873 TK2O00142 265 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 MAP2K7O14733 419 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 ZSCAN9O15535 394 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-224ENST00000523873 P2RX6O15547 441 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 RRP8O43159 456 aaKnown RBP12.27□□□□□ -0.45
VEGFA-224ENST00000523873 CPNE3O75131 537 aaKnown RBP12.27□□□□□ -0.45
VEGFA-224ENST00000523873 MED26O95402 600 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 MT-ND3P03897 115 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 KRT15P19012 456 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 WT1P19544 449 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-224ENST00000523873 HNMTP50135 292 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 IFFO1Q0D2I5 559 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 WASHC2DQ5SRD0 308 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 C1orf189Q5VU69 101 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 FAM199XQ6PEV8 388 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-224ENST00000523873 C19orf48Q6RUI8 117 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 LRRC69Q6ZNQ3 347 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 BPHLQ86WA6 291 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-224ENST00000523873 TDRPQ86YL5 185 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 KLHDC8AQ8IYD2 350 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 GPR135Q8IZ08 494 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 TCAIMQ8N3R3 496 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 SNX31Q8N9S9 440 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 OR8K5Q8NH50 307 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 RHEBL1Q8TAI7 183 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 CLIP3Q96DZ5 547 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 CABS1Q96KC9 395 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 ZFYVE21Q9BQ24 234 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 MACROD1Q9BQ69 325 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 SLC7A5P2Q9GIP4 190 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 TMEM216Q9P0N5 145 aa12.27□□□□□ -0.45
VEGFA-224ENST00000523873 DHCR7Q9UBM7 475 aaKnown RBP12.27□□□□□ -0.45
VEGFA-224ENST00000523873 CEP295Q9C0D2 2601 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 A0A087WV48 116 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 LCMT2O60294 686 aaKnown RBP12.26□□□□□ -0.45
VEGFA-224ENST00000523873 PRAMEF4O60810 478 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 STK16O75716 305 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 SBK3P0C264 359 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 GFAPP14136 432 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 LIFP15018 202 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 EZRP15311 586 aaKnown RBP12.26□□□□□ -0.45
VEGFA-224ENST00000523873 EPORP19235 508 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 RORAP35398 523 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 GGT5P36269 586 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 BCL6P41182 706 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 ATP1A2P50993 1020 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 CCR8P51685 355 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 SNRPNP63162 240 aaKnown RBP12.26□□□□□ -0.45
VEGFA-224ENST00000523873 TLE3Q04726 772 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 CDC16Q13042 620 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 SLC9A5Q14940 896 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 NAA25Q14CX7 972 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 SETDB1Q15047 1291 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 PFKFB4Q16877 469 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 TSNAXIP1Q2TAA8 658 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 HKDC1Q2TB90 917 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 MANEAQ5SRI9 462 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 PRAMEF9Q5VWM5 478 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 ESX1Q8N693 406 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 METTL27Q8N6F8 245 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-224ENST00000523873 IL22RA1Q8N6P7 574 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 ZNF740Q8NDX6 193 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 CT55Q8WUE5 264 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 MR1Q95460 341 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 ZNF285Q96NJ3 590 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 OR2A5Q96R48 311 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 CD244Q9BZW8 370 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 LHX9Q9NQ69 397 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 DNAJC11Q9NVH1 559 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 PCDHB3Q9Y5E6 796 aa12.26□□□□□ -0.45
VEGFA-224ENST00000523873 NUP210LQ5VU65 1888 aa12.25□□□□□ -0.45
VEGFA-224ENST00000523873 SYCE1LA8MT33 242 aa12.25□□□□□ -0.45
VEGFA-224ENST00000523873 EFSO43281 561 aa12.25□□□□□ -0.45
VEGFA-224ENST00000523873 KLK8O60259 260 aa12.25□□□□□ -0.45
VEGFA-224ENST00000523873 CDH16O75309 829 aa12.25□□□□□ -0.45
VEGFA-224ENST00000523873 SIX3O95343 332 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-224ENST00000523873 RBP1P09455 135 aa12.25□□□□□ -0.45
VEGFA-224ENST00000523873 COL6A2P12110 1019 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms