RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 KLHL20Q9Y2M5 609 aa4.58□□□□□ -1.68
HMGB1P23-201ENST00000518743 CLIC4Q9Y696 253 aa4.58□□□□□ -1.68
HMGB1P23-201ENST00000518743 HEPACAM2A8MVW5 462 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 MGST3O14880 152 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 MDM4O15151 490 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 CHADO15335 359 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 NDUFS4O43181 175 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 PRKAB2O43741 272 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 CLDN7O95471 211 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 EGFP01133 1207 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 RNF224P0DH78 156 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 PRF1P14222 555 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 GNSP15586 552 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 PSMA3P25788 255 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 MC5RP33032 325 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 OR1G1P47890 313 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 RASSF2P50749 326 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 ALDH3A2P51648 485 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 ADORA2A-AS1P86434 159 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 HSPB3Q12988 150 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 PTK6Q13882 451 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 SLMAPQ14BN4 828 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 E2F5Q15329 346 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 TYSND1Q2T9J0 566 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 SMTNL2Q2TAL5 461 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 SMU1Q2TAY7 513 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 DCST1Q5T197 706 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZDHHC20Q5W0Z9 365 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 C11orf57Q6ZUT1 292 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 DET1Q7L5Y6 550 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 TRAPPC11Q7Z392 1133 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 CENPVQ7Z7K6 275 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 SDCCAG8Q86SQ7 713 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 AACSQ86V21 672 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 FAM228AQ86W67 206 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 MFSD6LQ8IWD5 586 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 CCDC170Q8IYT3 715 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 DSELQ8IZU8 1212 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZNF444Q8N0Y2 327 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 ARL10Q8N8L6 244 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZBTB8BQ8NAP8 495 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 SPC24Q8NBT2 197 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 PAPD5Q8NDF8 572 aaKnown RBP4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 MAGEC3Q8TD91 643 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 CDHR1Q96JP9 859 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 EGLN2Q96KS0 407 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZNF830Q96NB3 372 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 MS4A10Q96PG2 267 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 SEPHS2Q99611 448 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 GPR88Q9GZN0 384 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 PXMP2Q9NR77 195 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 OLAHQ9NV23 265 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 ERAP1Q9NZ08 941 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 SLC24A2Q9UI40 661 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 RCOR1Q9UKL0 485 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 NME7Q9Y5B8 376 aa4.57□□□□□ -1.68
HMGB1P23-201ENST00000518743 MYH6P13533 1939 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 WDR19Q8NEZ3 1342 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 A0A087X1B8 175 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 GOLGA6L9A6NEM1 432 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 NPIPB8E9PQR5 432 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 M0QZ24 198 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 HS3ST1O14792 307 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 RAMP2O60895 175 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 TADA2AO75478 443 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 PRDM1O75626 825 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 C22orf31O95567 290 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 CLDN1O95832 211 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 FTCDO95954 541 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 BCL10O95999 233 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 IFNA2P01563 188 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 UBTFL1P0CB47 393 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 TGFB3P10600 412 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 INSRRP14616 1297 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 KRT4P19013 534 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 HLA-DPA1P20036 260 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 HOXA9P31269 272 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 TLX1P31314 330 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 MATKP42679 507 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 UQCRFS1P47985 274 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 CSNK2A1P68400 391 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZNF33AQ06730 810 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 FOXM1Q08050 763 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 GAGE2BQ13066 116 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZNF273Q14593 569 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 C2orf68Q2NKX9 166 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 MYLK3Q32MK0 819 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 GAGE2EQ4V326 116 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 GAGE2AQ6NT46 116 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 SHQ1Q6PI26 577 aaKnown RBP4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 KCTD18Q6PI47 426 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 METTL7BQ6UX53 244 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 KDM7AQ6ZMT4 941 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 CEP57Q86XR8 500 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 C4orf19Q8IY42 314 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 SIX6OS1Q8N1H7 587 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 ATAD1Q8NBU5 361 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 CSNK2A3Q8NEV1 391 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 PSMA8Q8TAA3 256 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms