RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 TCF7P36402 384 aaPredicted RBP2.06□□□□□ -2.08
RNF4-219ENST00000513450 NKX2-1P43699 371 aaPredicted RBP2.06□□□□□ -2.08
RNF4-219ENST00000513450 DNA2P51530 1060 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 CRIP2P52943 208 aaPredicted RBP2.06□□□□□ -2.08
RNF4-219ENST00000513450 PTENP60484 403 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 KRT83P78385 493 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 GCNT1Q02742 428 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 PTK6Q13882 451 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 OPCMLQ14982 345 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 TAZQ16635 292 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 ZRANB3Q5FWF4 1079 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 FFAR4Q5NUL3 377 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 GFI1BQ5VTD9 330 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 ARHGAP11AQ6P4F7 1023 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 CTR9Q6PD62 1173 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 SLC25A47Q6Q0C1 308 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 TMEM207Q6UWW9 146 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 NOTCH2NLQ7Z3S9 236 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 GPR141Q7Z602 305 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 ZNF329Q86UD4 541 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 CCDC60Q8IWA6 550 aaPredicted RBP2.06□□□□□ -2.08
RNF4-219ENST00000513450 RCOR2Q8IZ40 523 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 FAM9BQ8IZU0 186 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 FAM89BQ8N5H3 189 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 DBF4BQ8NFT6 615 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 OR5AP2Q8NGF4 316 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 OR1L3Q8NH93 324 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 GOT1L1Q8NHS2 421 aaPredicted RBP2.06□□□□□ -2.08
RNF4-219ENST00000513450 NCOA7Q8NI08 942 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 GRK7Q8WTQ7 553 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 APOBEC4Q8WW27 367 aaKnown RBP2.06□□□□□ -2.08
RNF4-219ENST00000513450 ZNRF4Q8WWF5 429 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 METTL21AQ8WXB1 218 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 NR4A3Q92570 626 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 ARHGAP45Q92619 1136 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 PYCR2Q96C36 320 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 GMPPAQ96IJ6 420 aaPredicted RBP2.06□□□□□ -2.08
RNF4-219ENST00000513450 CCDC114Q96M63 670 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 AK8Q96MA6 479 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 GDAP1L1Q96MZ0 367 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 LPAR4Q99677 370 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 LITAFQ99732 161 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 NKX3-1Q99801 234 aaPredicted RBP2.06□□□□□ -2.08
RNF4-219ENST00000513450 CCDC3Q9BQI4 270 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 FUCA2Q9BTY2 467 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 BARHL1Q9BZE3 327 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 P2RY12Q9H244 342 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 VPS33BQ9H267 617 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 ATP13A3Q9H7F0 1226 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 DDX43Q9NXZ2 648 aaKnown RBP2.06□□□□□ -2.08
RNF4-219ENST00000513450 VPS18Q9P253 973 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 IL36AQ9UHA7 158 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 LEF1Q9UJU2 399 aaPredicted RBP2.06□□□□□ -2.08
RNF4-219ENST00000513450 CDH7Q9ULB5 785 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 IGSF1Q8N6C5 1336 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 HEG1Q9ULI3 1381 aa2.06□□□□□ -2.08
RNF4-219ENST00000513450 YDJCA8MPS7 323 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 NPIPA3F8WFD2 350 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 NR5A2O00482 541 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 TEX28O15482 410 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 PRAF2O60831 178 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 SOCS5O75159 536 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 SLU7O95391 586 aaKnown RBP2.05□□□□□ -2.08
RNF4-219ENST00000513450 BAG3O95817 575 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 PLGP00747 810 aaPredicted RBP2.05□□□□□ -2.08
RNF4-219ENST00000513450 RLN1P04808 185 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 ATP1B1P05026 303 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 STAG3L1P0CL83 205 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 PRKAR1AP10644 381 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 PSMB4P28070 264 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 TLX1P31314 330 aaPredicted RBP2.05□□□□□ -2.08
RNF4-219ENST00000513450 SFTPDP35247 375 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 PMP22Q01453 160 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 IL10RBQ08334 325 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 SRSF9Q13242 221 aaKnown RBP eCLIP2.05□□□□□ -2.08
RNF4-219ENST00000513450 SGCGQ13326 291 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 TRIM29Q14134 588 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 ZNF74Q16587 644 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 MEP1BQ16820 701 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 SGSM1Q2NKQ1 1148 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 ALDH1L2Q3SY69 923 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 GPR33Q49SQ1 333 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 LBHQ53QV2 105 aaPredicted RBP2.05□□□□□ -2.08
RNF4-219ENST00000513450 FAM166AQ6J272 317 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 ADAM5Q6NVV9 412 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 FUT10Q6P4F1 479 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 SHQ1Q6PI26 577 aaKnown RBP2.05□□□□□ -2.08
RNF4-219ENST00000513450 FIP1L1Q6UN15 594 aaKnown RBP2.05□□□□□ -2.08
RNF4-219ENST00000513450 PRSS55Q6UWB4 352 aaPredicted RBP2.05□□□□□ -2.08
RNF4-219ENST00000513450 TMEM182Q6ZP80 229 aaPredicted RBP2.05□□□□□ -2.08
RNF4-219ENST00000513450 FCRLAQ7L513 359 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 LACC1Q8IV20 430 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 KLHL7Q8IXQ5 586 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 GPC2Q8N158 579 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 PRSS35Q8N3Z0 413 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 RAB42Q8N4Z0 105 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 WDSUB1Q8N9V3 476 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 CCDC63Q8NA47 563 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 ATAD1Q8NBU5 361 aa2.05□□□□□ -2.08
RNF4-219ENST00000513450 SLC37A3Q8NCC5 494 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms