RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 SLC5A8Q8N695 610 aa11.88□□□□□ -0.51
DDX41-215ENST00000512431 CSNK1A1LQ8N752 337 aa11.88□□□□□ -0.51
DDX41-215ENST00000512431 AMER3Q8N944 861 aa11.88□□□□□ -0.51
DDX41-215ENST00000512431 FAM57AQ8TBR7 257 aa11.88□□□□□ -0.51
DDX41-215ENST00000512431 SKA2Q8WVK7 121 aaPredicted RBP11.88□□□□□ -0.51
DDX41-215ENST00000512431 RERGQ96A58 199 aaPredicted RBP11.88□□□□□ -0.51
DDX41-215ENST00000512431 CYTH2Q99418 400 aa11.88□□□□□ -0.51
DDX41-215ENST00000512431 DPH7Q9BTV6 452 aa11.88□□□□□ -0.51
DDX41-215ENST00000512431 UCK2Q9BZX2 261 aa11.88□□□□□ -0.51
DDX41-215ENST00000512431 DRC3Q9H069 523 aa11.88□□□□□ -0.51
DDX41-215ENST00000512431 UTP6Q9NYH9 597 aaKnown RBP11.88□□□□□ -0.51
DDX41-215ENST00000512431 LRFN1Q9P244 771 aa11.88□□□□□ -0.51
DDX41-215ENST00000512431 ASB1Q9Y576 335 aa11.88□□□□□ -0.51
DDX41-215ENST00000512431 CACNA1CQ13936 2221 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 A0A0A6YYC8 382 aaPredicted RBP11.87□□□□□ -0.51
DDX41-215ENST00000512431 IGHV3-20A0A0C4DH32 117 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 OR2A25A4D2G3 310 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 GABRR3A8MPY1 467 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 I3L1I5 382 aaPredicted RBP11.87□□□□□ -0.51
DDX41-215ENST00000512431 APOC4-APOC2K7ER74 178 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 GPC4O75487 556 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 TOXO94900 526 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 APOC2P02655 101 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 CYC1P08574 325 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 DNASE1P24855 282 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 CTNNA2P26232 953 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 AVPR1BP47901 424 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 TAS2R50P59544 299 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 TPM4P67936 248 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 LTBQ06643 244 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 NDUFA9Q16795 377 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 SYT16Q17RD7 645 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 MINDY4Q4G0A6 757 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 CD163Q86VB7 1156 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 ZC3H7AQ8IWR0 971 aaKnown RBP11.87□□□□□ -0.51
DDX41-215ENST00000512431 AMER2Q8N7J2 671 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 MYRIPQ8NFW9 859 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 OR2A1Q8NGT9 310 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 M1APQ8TC57 530 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 MAGEC3Q8TD91 643 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 OLFM1Q99784 485 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 CARD6Q9BX69 1037 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 POLDIP3Q9BY77 421 aaKnown RBP11.87□□□□□ -0.51
DDX41-215ENST00000512431 ST6GALNAC2Q9UJ37 374 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 GNPTGQ9UJJ9 305 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 TTC7AQ9ULT0 858 aaPredicted RBP11.87□□□□□ -0.51
DDX41-215ENST00000512431 RNF6Q9Y252 685 aa11.87□□□□□ -0.51
DDX41-215ENST00000512431 RUVBL1Q9Y265 456 aaKnown RBP11.87□□□□□ -0.51
DDX41-215ENST00000512431 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.87□□□□□ -0.51
DDX41-215ENST00000512431 FBN3Q75N90 2809 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 A0A1B0GTH9 108 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 MACROD2A1Z1Q3 448 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 OR51F1A6NGY5 319 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 SOWAHDA6NJG2 315 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 CDK2AP1O14519 115 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 TFECO14948 347 aaPredicted RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 OR1I1O60431 355 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 NRP2O60462 931 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 PKMP14618 531 aaKnown RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 AGTR2P50052 363 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 ST13P50502 369 aaKnown RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 UBASH3AP57075 661 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 ACTN3Q08043 901 aaPredicted RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 HKDC1Q2TB90 917 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 DARS2Q6PI48 645 aaKnown RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 BBS12Q6ZW61 710 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 BIVMQ86UB2 503 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 CHERPQ8IWX8 916 aaKnown RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 HMGCLL1Q8TB92 370 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 MCOLN3Q8TDD5 553 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 HDAC10Q969S8 669 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 TMEM125Q96AQ2 219 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 MRFAP1L1Q96HT8 127 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 SPATA13Q96N96 652 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 FOPNLQ96NB1 174 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 ACAT2Q9BWD1 397 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 HEMGNQ9BXL5 484 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 VN1R1Q9GZP7 353 aa11.86□□□□□ -0.51
DDX41-215ENST00000512431 TP63Q9H3D4 680 aaPredicted RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 MRPS30Q9NP92 439 aaKnown RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 ZNHIT6Q9NWK9 470 aaKnown RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 ANKHD1Q8IWZ3 2542 aaKnown RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 SNRNP200O75643 2136 aaKnown RBP11.86□□□□□ -0.51
DDX41-215ENST00000512431 FAM237BA0A1B0GVD1 139 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 CCDC162PA2VCL2 907 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 CDC40O60508 579 aaKnown RBP eCLIP11.85□□□□□ -0.51
DDX41-215ENST00000512431 PRMT3O60678 531 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 SLC25A12O75746 678 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 ZNF189O75820 626 aaPredicted RBP11.85□□□□□ -0.51
DDX41-215ENST00000512431 NEURL1O76050 574 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 GYPCP04921 128 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 FOXN2P32314 431 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 PTGER1P34995 402 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 CCNFP41002 786 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 DGKQP52824 942 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 EIF3EP60228 445 aaKnown RBP11.85□□□□□ -0.51
DDX41-215ENST00000512431 MAT1AQ00266 395 aaKnown RBP11.85□□□□□ -0.51
DDX41-215ENST00000512431 TFF3Q07654 80 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 FAM53BQ14153 422 aa11.85□□□□□ -0.51
DDX41-215ENST00000512431 LANCL3Q6ZV70 420 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms