RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 Q96MT0 163 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 MYOCQ99972 504 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 DDX28Q9NUL7 540 aaKnown RBP17.21■□□□□ 0.35
NUP54-205ENST00000507257 MARCH2Q9P0N8 246 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 MAU2Q9Y6X3 613 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 A6NL46 340 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 IQCF5A8MTL0 148 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 ZNF7P17097 686 aaPredicted RBP17.21■□□□□ 0.35
NUP54-205ENST00000507257 TACR2P21452 398 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 KIR3DL1P43629 444 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 ALDH9A1P49189 494 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 CPT1AP50416 773 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 C19orf57Q0VDD7 668 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 NFE2Q16621 373 aaPredicted RBP17.21■□□□□ 0.35
NUP54-205ENST00000507257 PPP2R2DQ66LE6 453 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 NADSYN1Q6IA69 706 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 GALNT12Q8IXK2 581 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 LPCAT1Q8NF37 534 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 ANGPTL6Q8NI99 470 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 WDFY2Q96P53 400 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 EGFL8Q99944 293 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 GPRC5BQ9NZH0 403 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 CNOT2Q9NZN8 540 aaKnown RBP17.21■□□□□ 0.35
NUP54-205ENST00000507257 RAI2Q9Y5P3 530 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 KIAA0513O60268 411 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 EPN2O95208 641 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 PTHP01270 115 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 ANXA8P13928 327 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 SDC1P18827 310 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 SRSF11Q05519 484 aaKnown RBP17.2■□□□□ 0.34
NUP54-205ENST00000507257 PCDH1Q08174 1060 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 CACNB2Q08289 660 aaPredicted RBP17.2■□□□□ 0.34
NUP54-205ENST00000507257 HKDC1Q2TB90 917 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 GNASQ5JWF2 1037 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 OR4F3Q6IEY1 312 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 GDPGP1Q6ZNW5 385 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 NRARPQ7Z6K4 114 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 FAM124AQ86V42 546 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 KRT73Q86Y46 540 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 SYNPOQ8N3V7 929 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 STX19Q8N4C7 294 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 PSD4Q8NDX1 1056 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 RNF170Q96K19 258 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 CEP19Q96LK0 163 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 TRNT1Q96Q11 434 aaKnown RBP17.2■□□□□ 0.34
NUP54-205ENST00000507257 PHOX2BQ99453 314 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 CHCHD6Q9BRQ6 235 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 TTPALQ9BTX7 342 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 IL17CQ9P0M4 197 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 POFUT2Q9Y2G5 429 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 PCDHGA2Q9Y5H1 932 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 PLXNA4Q9HCM2 1894 aa17.2■□□□□ 0.34
NUP54-205ENST00000507257 A0A0D9SEW6 157 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 A0A0U1RQS6 177 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 SH3D21A4FU49 640 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.19■□□□□ 0.34
NUP54-205ENST00000507257 ADAMDEC1O15204 470 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 SSX4O60224 188 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 GUCA1CO95843 209 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 VIPP01282 170 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 STSP08842 583 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 ENGP17813 658 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 ITGB6P18564 788 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 C21orf58P58505 322 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 KCNJ10P78508 379 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 NXNL2Q5VZ03 156 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 ZNF772Q68DY9 489 aaPredicted RBP17.19■□□□□ 0.34
NUP54-205ENST00000507257 PTRHD1Q6GMV3 140 aaKnown RBP17.19■□□□□ 0.34
NUP54-205ENST00000507257 KIAA1841Q6NSI8 718 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 GPR153Q6NV75 609 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 ZNF605Q86T29 641 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 ANKRD46Q86W74 232 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 ATCAYQ86WG3 371 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 TCAIMQ8N3R3 496 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 MYEOVQ96EZ4 313 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 MED30Q96HR3 178 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 RIPOR3Q96MK2 946 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 TMEM246Q9BRR3 403 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 CIPCQ9C0C6 399 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 CLPBQ9H078 707 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 ITM2CQ9NQX7 267 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 ADARB2Q9NS39 739 aaKnown RBP17.19■□□□□ 0.34
NUP54-205ENST00000507257 ZNF226Q9NYT6 803 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 PCDHB5Q9Y5E4 795 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 EFCAB10A6NFE3 127 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 F5H5T6 163 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 STK16O75716 305 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 YES1P07947 543 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 PRPS1L1P21108 318 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 TNFSF8P32971 234 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 SLC39A12Q504Y0 691 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 YIF1BQ5BJH7 314 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 SPRYD7Q5W111 196 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 CSGALNACT1Q8TDX6 532 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 TTC9Q92623 222 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 KCNC2Q96PR1 638 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 TAPBPLQ9BX59 468 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 RACGAP1Q9H0H5 632 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 RNF167Q9H6Y7 350 aa17.19■□□□□ 0.34
NUP54-205ENST00000507257 SMURF1Q9HCE7 757 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms