RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 PDCD2Q16342 344 aaPredicted RBP12.27□□□□□ -0.45
TRAF4-208ENST00000469529 CPSF6Q16630 551 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAF4-208ENST00000469529 GALNTL6Q49A17 601 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 CATSPEREQ5SY80 951 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 THEMIS2Q5TEJ8 643 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 ZNF425Q6IV72 752 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 ZCCHC8Q6NZY4 707 aaKnown RBP12.27□□□□□ -0.45
TRAF4-208ENST00000469529 TMIGD1Q6UXZ0 262 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 SPATA19Q7Z5L4 167 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 MTDHQ86UE4 582 aaKnown RBP12.27□□□□□ -0.45
TRAF4-208ENST00000469529 CARFQ8N187 725 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 FITM2Q8N6M3 262 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 ARL10Q8N8L6 244 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 TTLQ8NG68 377 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 AGR3Q8TD06 166 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 PATE1Q8WXA2 126 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 CCT6BQ92526 530 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 PPP3R2Q96LZ3 170 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 RILPQ96NA2 401 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 OR2A14Q96R47 310 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 AIF1LQ9BQI0 150 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 CHRNA10Q9GZZ6 450 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 ELOVL6Q9H5J4 265 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 ZNF385DQ9H6B1 395 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 XKR8Q9H6D3 395 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 CAAP1Q9H8G2 361 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 AKTIPQ9H8T0 292 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 SAR1AQ9NR31 198 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 ASIC5Q9NY37 505 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 SPHK1Q9NYA1 384 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 TAC3Q9UHF0 121 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 PCDHGB2Q9Y5G2 931 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 MYO15AQ9UKN7 3530 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 KNL1Q8NG31 2342 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 IGKV1-8A0A0C4DH67 115 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 GOLGA8QA0A0J9YX86 632 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 GOLGA8OA6NCC3 632 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 C2orf74A8MZ97 194 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 GOLGA8NF8WBI6 632 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 RSL1D1O76021 490 aaKnown RBP12.26□□□□□ -0.45
TRAF4-208ENST00000469529 LINC00032P0C843 101 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 ALPPL2P10696 532 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 GLB1P16278 677 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 VARSP26640 1264 aaKnown RBP12.26□□□□□ -0.45
TRAF4-208ENST00000469529 ARFIP1P53367 373 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 CSNK1G2P78368 415 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 REEP5Q00765 189 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 SPEM2Q0P670 501 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 KIAA0040Q15053 153 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 SF1Q15637 639 aaKnown RBP12.26□□□□□ -0.45
TRAF4-208ENST00000469529 TRIM61Q5EBN2 209 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 C6orf136Q5SQH8 315 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 CLNKQ7Z7G1 428 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 OR4C6Q8NH72 309 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 SELENOMQ8WWX9 145 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 THAP11Q96EK4 314 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 C11orf24Q96F05 449 aaPredicted RBP12.26□□□□□ -0.45
TRAF4-208ENST00000469529 NRTNQ99748 197 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 GAREM1Q9H706 876 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 MRPS30Q9NP92 439 aaKnown RBP12.26□□□□□ -0.45
TRAF4-208ENST00000469529 PARD6AQ9NPB6 346 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 NMRK1Q9NWW6 199 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 HRASLS2Q9NWW9 162 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 SH2B3Q9UQQ2 575 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 TMED5Q9Y3A6 229 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 ATXN2Q99700 1313 aaKnown RBP12.26□□□□□ -0.45
TRAF4-208ENST00000469529 ZNF292O60281 2723 aa12.26□□□□□ -0.45
TRAF4-208ENST00000469529 CACNA1EQ15878 2313 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 TRBC2A0A5B9 178 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 OR6C74A6NCV1 312 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 CAPN14A8MX76 684 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 B4DGG1 531 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 H7BY64 318 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 FCHO1O14526 889 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 KHNYNO15037 678 aaKnown RBP12.25□□□□□ -0.45
TRAF4-208ENST00000469529 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
TRAF4-208ENST00000469529 UBDO15205 165 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 ZW10O43264 779 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 LRP3O75074 770 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 SKAP2O75563 359 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-208ENST00000469529 PDYNP01213 254 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 CDH1P12830 882 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 TGM1P22735 817 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 PTX3P26022 381 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-208ENST00000469529 AHRP35869 848 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 MPLP40238 635 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 ARL1P40616 181 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-208ENST00000469529 SCTRP47872 440 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 ACADVLP49748 655 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 CCT8P50990 548 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 ERVK-8P63133 956 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 MAD2L1Q13257 205 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-208ENST00000469529 CUL3Q13618 768 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 SLBPQ14493 270 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRAF4-208ENST00000469529 PLCL1Q15111 1095 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 ZSCAN26Q16670 478 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 GSTA3Q16772 222 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 DEFB133Q30KQ1 61 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 TMPRSS11BQ86T26 416 aa12.25□□□□□ -0.45
TRAF4-208ENST00000469529 OOSP2Q86WS3 158 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms