RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CCBE1Q6UXH8 406 aaPredicted RBP11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 SERPINA11Q86U17 422 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 RBFAQ8N0V3 343 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 UBTD2Q8WUN7 234 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 GGHQ92820 318 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 NELL1Q92832 810 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 CEP295NLQ96MC4 621 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 ELOVL6Q9H5J4 265 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 RLIMQ9NVW2 624 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 SPATA7Q9P0W8 599 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 MBD1Q9UIS9 605 aaPredicted RBP11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 SNX6Q9UNH7 406 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 HELZP42694 1942 aaKnown RBP11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 NT5C1B-RDH14C9J2C7 533 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 FAM47E-STBD1D6RA91 191 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 DUSP11O75319 330 aaKnown RBP11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 SH3BGRLO75368 114 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 CLDN11O75508 207 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 PTHP01270 115 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 STSP08842 583 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 ADRA2AP08913 450 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 ACRV1P26436 265 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 ATP5C1P36542 298 aaKnown RBP11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 KIR3DL1P43629 444 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 SLC11A2P49281 568 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 WNT3P56703 355 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 RHOAP61586 193 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 CHRNA6Q15825 494 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 TTLL9Q3SXZ7 439 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 CBLL1Q75N03 491 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 GDPD3Q7L5L3 318 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 FAM124AQ86V42 546 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 PIH1D2Q8WWB5 315 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 IPCEF1Q8WWN9 437 aaPredicted RBP11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 ZNF486Q96H40 463 aaPredicted RBP11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 CHCHD6Q9BRQ6 235 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 ARL15Q9NXU5 204 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 DNMT3LQ9UJW3 386 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 BTBD3Q9Y2F9 522 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 KCNE1BA0A087WTH5 132 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 ISPDA4D126 451 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 SLC38A8A6NNN8 435 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 OPN1SWP03999 348 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 HSMCR30P0CW71 290 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 RPS3P23396 243 aaKnown RBP eCLIP11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 UGT2B10P36537 528 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 RPIAP49247 311 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 GATMP50440 423 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 COPZ1P61923 177 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 ARMC12Q5T9G4 340 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 NEK5Q6P3R8 708 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 RNF165Q6ZSG1 346 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 EIF3MQ7L2H7 374 aaKnown RBP11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 SLC46A3Q7Z3Q1 461 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 TSEN54Q7Z6J9 526 aaKnown RBP11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 OR52J3Q8NH60 311 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 ZNF675Q8TD23 568 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 TESCQ96BS2 214 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 MYO19Q96H55 970 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 HRASLS5Q96KN8 279 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 C14orf119Q9NWQ9 140 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 PSORS1C1Q9UIG5 152 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 CRLS1Q9UJA2 301 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 E9PQ18 207 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 GFRA2O00451 464 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 KMOO15229 486 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 COCHO43405 550 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 C9P02748 559 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 ADORA3P0DMS8 318 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 BPIP17213 487 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 ITPKAP23677 461 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 IDH2P48735 452 aaKnown RBP11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 RTP2Q5QGT7 225 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 CERS6Q6ZMG9 384 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 USP43Q70EL4 1123 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 WFDC5Q8TCV5 224 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 C7orf34Q96L11 122 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 ZFYVE1Q9HBF4 777 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 NEK6Q9HC98 313 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 RPS6KA6Q9UK32 745 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 IFT52Q9Y366 437 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 A0A1B0GVM2 712 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 MAGEB17A8MXT2 336 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 TMEM229AB2RXF0 380 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 TAF4O00268 1085 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 AP3D1O14617 1153 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 DYRK3O43781 588 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 SCN2BO60939 215 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 STC2O76061 302 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 EPN2O95208 641 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 PRPS2P11908 318 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 ACPPP15309 386 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 AMD1P17707 334 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 KCNJ10P78508 379 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 IRF5Q13568 498 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 TBCEQ15813 527 aaPredicted RBP11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 DUOXA1Q1HG43 343 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 CYP27C1Q4G0S4 372 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 NOXRED1Q6NXP6 359 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms