RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 DFNA5O60443 496 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 LUC7L3O95232 432 aaKnown RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CRYGCP07315 174 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CAPN1P07384 714 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 OR2T7P0C7T2 308 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 RRASP10301 218 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CEBPBP17676 345 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 UBA1P22314 1058 aaKnown RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 HRH2P25021 359 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CYP2C18P33260 490 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 GRIA1P42261 906 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 NSFP46459 744 aaKnown RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CDX1P47902 265 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CRYBB1P53674 252 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 PLTPP55058 493 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 SNRPEP62304 92 aaKnown RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CXADRP78310 365 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 SIM1P81133 766 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CBX1P83916 185 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CCDC173Q0VFZ6 552 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 TROAPQ12815 778 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 UBE2V1Q13404 147 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 PKP1Q13835 747 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 IL18Q14116 193 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 DHX34Q14147 1143 aaKnown RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 ACKR1Q16570 336 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 TPD52L1Q16890 204 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 ANXA2RQ3ZCQ2 193 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 C1QL3Q5VWW1 255 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CARD17Q5XLA6 110 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 KCNV1Q6PIU1 500 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 Q6ZWC4 215 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 LINGO2Q7L985 606 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 ECHDC2Q86YB7 292 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 KATNAL2Q8IYT4 538 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 DSELQ8IZU8 1212 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 ZNF276Q8N554 614 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 NECAB1Q8N987 351 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 LINC01356Q8N9X3 169 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 B3GALNT2Q8NCR0 500 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 MDGA1Q8NFP4 955 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 OR9K2Q8NGE7 335 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 OR52N4Q8NGI2 321 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 MYCBPAPQ8TBZ2 947 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 SLC2A14Q8TDB8 520 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 FKBP10Q96AY3 582 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 TEPSINQ96N21 525 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 OR1F2PQ96R84 312 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 LMF1Q96S06 567 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 MMTAG2Q9BU76 263 aaKnown RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 FTHL17Q9BXU8 183 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 WWP1Q9H0M0 922 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 SNX25Q9H3E2 840 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 CDH20Q9HBT6 801 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 HINT3Q9NQE9 182 aaKnown RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 FAM207AQ9NSI2 230 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 ACSS1Q9NUB1 689 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 OR6C2Q9NZP2 312 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 SPATA7Q9P0W8 599 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 STK39Q9UEW8 545 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 NOCTQ9UK39 431 aaKnown RBP5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 PCDHA7Q9UN72 937 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 IFT52Q9Y366 437 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 GRIP1Q9Y3R0 1128 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 BECN2A8MW95 431 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 J3QR06 171 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 ABCD4O14678 606 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 PEX10O60683 326 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 RGS11O94810 467 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 UFL1O94874 794 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 CYP2D6P10635 497 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 CEACAM1P13688 526 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 CHI3L1P36222 383 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 PTGFRP43088 359 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 LEPRP48357 1165 aaKnown RBP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 ALDH7A1P49419 539 aaKnown RBP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 METAP2P50579 478 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 CCL11P51671 97 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 COPB1P53618 953 aaKnown RBP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 RPL23AP62750 156 aaKnown RBP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 CSNK2BP67870 215 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 IRX4P78413 519 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 ITGADQ13349 1161 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 MSLNQ13421 630 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 XRCC4Q13426 336 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 TOB2Q14106 344 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 MFSD13AQ14CX5 517 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 ELAVL1Q15717 326 aaKnown RBP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 PTGISQ16647 500 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 PCK2Q16822 640 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 CMPK2Q5EBM0 449 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 RNASE12Q5GAN4 147 aaKnown RBP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 C6orf10Q5SRN2 563 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 AGAP6Q5VW22 663 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 TTC23Q5W5X9 447 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 LYSMD4Q5XG99 296 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 ZNF770Q6IQ21 691 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 PLEKHA7Q6IQ23 1121 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 FAM166AQ6J272 317 aa5.04□□□□□ -1.6
HMGB3P10-201ENST00000434734 C6orf89Q6UWU4 347 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms