RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 TMEM150AQ86TG1 271 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 TTC16Q8NEE8 873 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 ASB11Q8WXH4 323 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 LGALS12Q96DT0 336 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 EPYCQ99645 322 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 BARD1Q99728 777 aaKnown RBP17.4■□□□□ 0.38
PHF1-201ENST00000374512 MAPRE3Q9UPY8 281 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 IGLV3-16A0A075B6K0 115 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 CXorf51AA0A1B0GTR3 108 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 TMEM247A6NEH6 219 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 MAGEB17A8MXT2 336 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 PRRG1O14668 218 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 AOAHP28039 575 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 CD40LGP29965 261 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 VBP1P61758 197 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 Q6ZNB5 142 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 LACC1Q8IV20 430 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 APCDD1Q8J025 514 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 NAT16Q8N8M0 369 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 APIPQ96GX9 242 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 SLC22A12Q96S37 553 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 INIPQ9NRY2 104 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 DNAJC11Q9NVH1 559 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 CORO2BQ9UQ03 480 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 OR2A25A4D2G3 310 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 GREM1O60565 184 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 CNOT3O75175 753 aaKnown RBP17.39■□□□□ 0.37
PHF1-201ENST00000374512 C9P02748 559 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 BMP4P12644 408 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 CYP4B1P13584 511 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 PPIBP23284 216 aaKnown RBP17.39■□□□□ 0.37
PHF1-201ENST00000374512 CCR7P32248 378 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 NEK2P51955 445 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 IL1RL1Q01638 556 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 NPRL3Q12980 569 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 SLC14A1Q13336 389 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 MLIPQ5VWP3 458 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 TUBA3EQ6PEY2 450 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 PLEKHG7Q6ZR37 379 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 TPRG1Q6ZUI0 275 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 FAM217AQ8IXS0 508 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 ARL14EPQ8N8R7 260 aaPredicted RBP17.39■□□□□ 0.37
PHF1-201ENST00000374512 ATG16L2Q8NAA4 619 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 OR10Q1Q8NGQ4 319 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 ADAMTS19Q8TE59 1207 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 BHMTQ93088 406 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 APOLD1Q96LR9 279 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 REXO4Q9GZR2 422 aaKnown RBP17.39■□□□□ 0.37
PHF1-201ENST00000374512 OSGIN1Q9UJX0 560 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 PMF1-BGLAPU3KQ54 211 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 ISPDA4D126 451 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 TOR1BO14657 336 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 SMAD6O43541 496 aaKnown RBP17.39■□□□□ 0.37
PHF1-201ENST00000374512 SCN2BO60939 215 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 JUPP14923 745 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 FSHRP23945 695 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 UGT2B10P36537 528 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 HALP42357 657 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 PPP5CP53041 499 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 EPHB3P54753 998 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 VLDLRP98155 873 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 PERM1Q5SV97 790 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 LIPJQ5W064 366 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.39■□□□□ 0.37
PHF1-201ENST00000374512 CCDC81Q6ZN84 652 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 DEFB128Q7Z7B8 93 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 PTOV1Q86YD1 416 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 SYT12Q8IV01 421 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 GPR26Q8NDV2 337 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 RHOXF1Q8NHV9 184 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 HSH2DQ96JZ2 352 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 HRASLS5Q96KN8 279 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 GABARAPL3Q9BY60 117 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 SLIRPQ9GZT3 109 aaKnown RBP17.39■□□□□ 0.37
PHF1-201ENST00000374512 PPIL1Q9Y3C6 166 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 A3GALT2U3KPV4 340 aa17.39■□□□□ 0.37
PHF1-201ENST00000374512 KPNA5O15131 536 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 AXIN1O15169 862 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 FADS2O95864 444 aaKnown RBP17.38■□□□□ 0.37
PHF1-201ENST00000374512 CYP2A7P20853 494 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 KCNC3Q14003 757 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 PTCHD3Q3KNS1 767 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 PLEKHS1Q5SXH7 462 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 LAIR1Q6GTX8 287 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 PLD3Q8IV08 490 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 KIAA1958Q8N8K9 716 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 SLC38A4Q969I6 547 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 SCRN2Q96FV2 425 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 MMP27Q9H306 513 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 PLCXD1Q9NUJ7 323 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 THUMPD1Q9NXG2 353 aaKnown RBP17.38■□□□□ 0.37
PHF1-201ENST00000374512 TRIM17Q9Y577 477 aa17.38■□□□□ 0.37
PHF1-201ENST00000374512 TTC34A8MYJ7 566 aa17.37■□□□□ 0.37
PHF1-201ENST00000374512 GFYI3L273 518 aa17.37■□□□□ 0.37
PHF1-201ENST00000374512 hCG_2039718K7EN88 272 aa17.37■□□□□ 0.37
PHF1-201ENST00000374512 LRATO95237 230 aa17.37■□□□□ 0.37
PHF1-201ENST00000374512 OLFM2O95897 454 aa17.37■□□□□ 0.37
PHF1-201ENST00000374512 KRT20P35900 424 aa17.37■□□□□ 0.37
PHF1-201ENST00000374512 PXNP49023 591 aaPredicted RBP17.37■□□□□ 0.37
PHF1-201ENST00000374512 WNT3P56703 355 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms