RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 FLVCR1-AS1Q8TAF5 88 aa17.9■□□□□ 0.46
CLN3-206ENST00000360019 ELF4Q99607 663 aaPredicted RBP17.9■□□□□ 0.46
CLN3-206ENST00000360019 LRTM1Q9HBL6 345 aa17.9■□□□□ 0.46
CLN3-206ENST00000360019 SLC6A20Q9NP91 592 aa17.9■□□□□ 0.46
CLN3-206ENST00000360019 AIG1Q9NVV5 245 aa17.9■□□□□ 0.46
CLN3-206ENST00000360019 TAGLN3Q9UI15 199 aa17.9■□□□□ 0.46
CLN3-206ENST00000360019 GPR45Q9Y5Y3 372 aa17.9■□□□□ 0.46
CLN3-206ENST00000360019 HEATR5BQ9P2D3 2071 aa17.9■□□□□ 0.46
CLN3-206ENST00000360019 TMEM131Q92545 1883 aa17.9■□□□□ 0.46
CLN3-206ENST00000360019 MAGEB17A8MXT2 336 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 NPIPB8E9PQR5 432 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 ETHE1O95571 254 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 CALB2P22676 271 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 PRPH2P23942 346 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 CPA2P48052 419 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 CSNK1G2P78368 415 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 REEP5Q00765 189 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 EMX2Q04743 252 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 BNIP3Q12983 259 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 CSTF3Q12996 717 aaKnown RBP17.89■□□□□ 0.45
CLN3-206ENST00000360019 KIAA0040Q15053 153 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 SF1Q15637 639 aaKnown RBP17.89■□□□□ 0.45
CLN3-206ENST00000360019 HIST2H2ACQ16777 129 aaPredicted RBP17.89■□□□□ 0.45
CLN3-206ENST00000360019 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.89■□□□□ 0.45
CLN3-206ENST00000360019 HIST2H2AA3Q6FI13 130 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 TMIGD1Q6UXZ0 262 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 TMEM26Q6ZUK4 368 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 C17orf82Q86X59 251 aaPredicted RBP17.89■□□□□ 0.45
CLN3-206ENST00000360019 RBM12BQ8IXT5 1001 aaKnown RBP17.89■□□□□ 0.45
CLN3-206ENST00000360019 ARL14Q8N4G2 192 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 REPS1Q96D71 796 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 TUBB6Q9BUF5 446 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 MRPS30Q9NP92 439 aaKnown RBP17.89■□□□□ 0.45
CLN3-206ENST00000360019 C1orf109Q9NX04 203 aa17.89■□□□□ 0.45
CLN3-206ENST00000360019 OR6C74A6NCV1 312 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 ISM1B1AKI9 464 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 PPM1DO15297 605 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 NRP2O60462 931 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 ANXA6P08133 673 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 ESRRAP11474 423 aaPredicted RBP17.88■□□□□ 0.45
CLN3-206ENST00000360019 IDO1P14902 403 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 GPX3P22352 226 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 FASLGP48023 281 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 ABATP80404 500 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 GSTA3Q16772 222 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 ZFAND4Q86XD8 727 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 KRT78Q8N1N4 520 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 SLC25A45Q8N413 288 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 OR9I1Q8NGQ6 314 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 OR10G6Q8NH81 332 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 SLC7A6OSQ96CW6 309 aaPredicted RBP17.88■□□□□ 0.45
CLN3-206ENST00000360019 APIPQ96GX9 242 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 SLC45A3Q96JT2 553 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 AIF1LQ9BQI0 150 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 BRINP2Q9C0B6 783 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 BRF2Q9HAW0 419 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 FSCN3Q9NQT6 498 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 SDR39U1Q9NRG7 319 aaPredicted RBP17.88■□□□□ 0.45
CLN3-206ENST00000360019 LOC100653049A0A140TA62 436 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 FAM221BA6H8Z2 402 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 PSMD12O00232 456 aaPredicted RBP17.88■□□□□ 0.45
CLN3-206ENST00000360019 SEC22BO75396 215 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 KRT34O76011 436 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 HSD3B1P14060 373 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 POLR2CP19387 275 aaPredicted RBP17.88■□□□□ 0.45
CLN3-206ENST00000360019 HSD3B2P26439 372 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 RXRGP48443 463 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 NME5P56597 212 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 STX1BP61266 288 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 RPS13P62277 151 aaKnown RBP17.88■□□□□ 0.45
CLN3-206ENST00000360019 KIR2DS3Q14952 304 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 SMU1Q2TAY7 513 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 IL23RQ5VWK5 629 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 KIAA1614Q5VZ46 1190 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 OGFOD3Q6PK18 319 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 PAOXQ6QHF9 649 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 VN1R5Q7Z5H4 357 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 ANKRD53Q8N9V6 530 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 UBE2E3Q969T4 207 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 OR2A14Q96R47 310 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 TBC1D10AQ9BXI6 508 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 MRGBPQ9NV56 204 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 TSC22D4Q9Y3Q8 395 aa17.88■□□□□ 0.45
CLN3-206ENST00000360019 POLR3HQ9Y535 204 aaPredicted RBP17.88■□□□□ 0.45
CLN3-206ENST00000360019 FEZF1A0PJY2 475 aa17.87■□□□□ 0.45
CLN3-206ENST00000360019 ATP5HO75947 161 aa17.87■□□□□ 0.45
CLN3-206ENST00000360019 GIMD1P0DJR0 217 aa17.87■□□□□ 0.45
CLN3-206ENST00000360019 COX4I1P13073 169 aa17.87■□□□□ 0.45
CLN3-206ENST00000360019 PRDX6P30041 224 aa17.87■□□□□ 0.45
CLN3-206ENST00000360019 MRPL19P49406 292 aaKnown RBP17.87■□□□□ 0.45
CLN3-206ENST00000360019 SIM2Q14190 667 aaPredicted RBP17.87■□□□□ 0.45
CLN3-206ENST00000360019 RBBP5Q15291 538 aaKnown RBP17.87■□□□□ 0.45
CLN3-206ENST00000360019 C10orf62Q5T681 223 aaPredicted RBP17.87■□□□□ 0.45
CLN3-206ENST00000360019 GK5Q6ZS86 529 aa17.87■□□□□ 0.45
CLN3-206ENST00000360019 ADCK2Q7Z695 626 aa17.87■□□□□ 0.45
CLN3-206ENST00000360019 PLD3Q8IV08 490 aa17.87■□□□□ 0.45
CLN3-206ENST00000360019 FUNDC1Q8IVP5 155 aa17.87■□□□□ 0.45
CLN3-206ENST00000360019 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.87■□□□□ 0.45
CLN3-206ENST00000360019 MIER2Q8N344 545 aa17.87■□□□□ 0.45
CLN3-206ENST00000360019 SLC22A18Q96BI1 424 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms