RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 DPEP2Q9H4A9 486 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 MATN4O95460 622 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 GALTP07902 379 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 ACP5P13686 325 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 RAB6CQ53S08 254 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 ATG9BQ674R7 924 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 FAM129CQ86XR2 697 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 NPWQ8N729 165 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 C5orf34Q96MH7 638 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 IL4I1Q96RQ9 567 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 TRIB3Q96RU7 358 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 RAB6CQ9H0N0 254 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 TOR3AQ9H497 397 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 CTPS2Q9NRF8 586 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 MBD2Q9UBB5 411 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 KLHL18O94889 574 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 CSTF2P33240 577 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 CASP9P55211 416 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 GALNT1Q10472 559 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 CBX3Q13185 183 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 FAM110BQ8TC76 370 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 IGSF8Q969P0 613 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 C12orf43Q96C57 262 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 HSH2DQ96JZ2 352 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 AIG1Q9NVV5 245 aa16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 SPIN1Q9Y657 262 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC11-201ENST00000334690 BTN3A3O00478 584 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 LDOC1O95751 146 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 IGFALSP35858 605 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 MAGEA6P43360 314 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 PM20D1Q6GTS8 502 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 RANBP10Q6VN20 620 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 SLC15A3Q8IY34 581 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ITPAQ9BY32 194 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 KCNH6Q9H252 994 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 OR51V1Q9H2C8 321 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 SP140LQ9H930 580 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ELL3Q9HB65 397 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ZCWPW2A0A1B0GU75 182 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ACOX3O15254 700 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 COCHO43405 550 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ORC5O43913 435 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ADH5P11766 374 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 MAT2AP31153 395 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ARFIP1P53367 373 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ATP6AP1Q15904 470 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 COQ5Q5HYK3 327 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 KIAA1614Q5VZ46 1190 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 FAM180AQ6UWF9 173 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 KCNC2Q96PR1 638 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 A0A0G2JN53 185 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 TLR4O00206 839 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 PTGESO14684 152 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 INMTO95050 263 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 TFPIP10646 304 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ACTR1BP42025 376 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 CLCNKAP51800 687 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ACTR1AP61163 376 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ZNF829Q3KNS6 432 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 ADNP2Q6IQ32 1131 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 FRRS1Q6ZNA5 592 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 FAM43BQ6ZT52 329 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 OR10H4Q8NGA5 316 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 OR5AK3PQ8NH89 298 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 GPR151Q8TDV0 419 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 FBXL20Q96IG2 436 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 PKP4Q99569 1192 aa16.61■□□□□ 0.25
TRAPPC11-201ENST00000334690 CPSF4LA6NMK7 179 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 RLN1P04808 185 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 MOGQ16653 247 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 MINDY4Q4G0A6 757 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 CEACAM20Q6UY09 585 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 MMAAQ8IVH4 418 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 RNASE11Q8TAA1 199 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 SMURF2Q9HAU4 748 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 NENFQ9UMX5 172 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 MYH1P12882 1939 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 TIAM2Q8IVF5 1701 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 ERI3O43414 337 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 PABPC4LP0CB38 370 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 Q6ZVL8 140 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 HDAC2Q92769 488 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 NSUN5Q96P11 429 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 IFT27Q9BW83 186 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 EDDM13A0A1B0GTR0 161 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 TYRP14679 529 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 CCND3P30281 292 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 GRK6P43250 576 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 GRB7Q14451 532 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 CARTPTQ16568 116 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 ADGRD2Q7Z7M1 963 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 CELF5Q8N6W0 485 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 MED28Q9H204 178 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 MOV10Q9HCE1 1003 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 MARCH4Q9P2E8 410 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 TAC3Q9UHF0 121 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 ADAMTS6Q9UKP5 1117 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 CLEC4AQ9UMR7 237 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 NUP98P52948 1817 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 DAPL1A0PJW8 107 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms