RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 KRT77Q7Z794 578 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 PHC3Q8NDX5 983 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 CCM2LQ9NUG4 571 aaPredicted RBP16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 TDP1Q9NUW8 608 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 PLAGL1Q9UM63 463 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 DLGAP4Q9Y2H0 992 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 GPC6Q9Y625 555 aaPredicted RBP16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 KHDRBS3O75525 346 aaKnown RBP16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 VBP1P61758 197 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 ZNF155Q12901 538 aaPredicted RBP16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 ILF3Q12906 894 aaKnown RBP eCLIP16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 C18orf21Q32NC0 220 aaPredicted RBP16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 RTP2Q5QGT7 225 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 C22orf39Q6P5X5 142 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 HDDC3Q8N4P3 179 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 PIGXQ8TBF5 258 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 SNX33Q8WV41 574 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 IPCEF1Q8WWN9 437 aaPredicted RBP16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 ZNF382Q96SR6 550 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 ITM2CQ9NQX7 267 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 TMEM98Q9Y2Y6 226 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 C2orf78A6NCI8 922 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 FABP12A6NFH5 140 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 SAGE2PA6NJ88 616 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 INMTO95050 263 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 FPR1P21462 350 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 DNAJB1P25685 340 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 CMPK1P30085 196 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 DSTNP60981 165 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 LRRC32Q14392 662 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 RBM48Q5RL73 367 aaKnown RBP16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 C3orf58Q8NDZ4 430 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 NRG4Q8WWG1 115 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 ING3Q9NXR8 418 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 ZNF221Q9UK13 617 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 INSL5Q9Y5Q6 135 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 NUP98P52948 1817 aa16.66■□□□□ 0.26
SLC1A4-201ENST00000234256 DHFRP00374 187 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 TCEA1P23193 301 aaKnown RBP16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 HNF1BP35680 557 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 PPP2R2BQ00005 443 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ABRAXAS2Q15018 415 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 SUZ12Q15022 739 aaKnown RBP16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 TMIGD1Q6UXZ0 262 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 TAF8Q7Z7C8 310 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 HERVK_113Q902F9 699 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 MRM3Q9HC36 420 aaKnown RBP16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ZDHHC4Q9NPG8 344 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ST14Q9Y5Y6 855 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 C8orf89P0DMQ9 161 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 CHRM1P11229 460 aaPredicted RBP16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 BCKDHAP12694 445 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 CPN2P22792 545 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 CSTF2P33240 577 aaKnown RBP eCLIP16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 MAGEA11P43364 429 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 OMPP47874 163 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ABATP80404 500 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 NEK5Q6P3R8 708 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ATP6V1C2Q8NEY4 427 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 CNIH3Q8TBE1 160 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ZNF347Q96SE7 839 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ARHGEF33A8MVX0 844 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 KCNA5P22460 613 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ZNF423Q2M1K9 1284 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 FAM91A1Q658Y4 838 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 LRRC70Q7Z2Q7 622 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 GPR151Q8TDV0 419 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 SLC22A17Q8WUG5 538 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ZUFSPQ96AP4 578 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 SORT1Q99523 831 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 CDC14AQ9UNH5 594 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ERVW-1Q9UQF0 538 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 KCNK6Q9Y257 313 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 MATN4O95460 622 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 C6orf47O95873 294 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 XKP51811 444 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ERVK-21P61565 698 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ADGRG6Q86SQ4 1221 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 SLC45A3Q96JT2 553 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 ZNF641Q96N77 438 aaPredicted RBP16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 SMIM14Q96QK8 99 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 S100A13Q99584 98 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 CXCL16Q9H2A7 254 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 SMOXQ9NWM0 555 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 SPATA7Q9P0W8 599 aa16.65■□□□□ 0.26
SLC1A4-201ENST00000234256 MYH1P12882 1939 aa16.64■□□□□ 0.26
SLC1A4-201ENST00000234256 CAPN3P20807 821 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 DNASE1L3Q13609 305 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 GPR68Q15743 365 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 PIGGQ5H8A4 983 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 ATAT1Q5SQI0 421 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 BRAT1Q6PJG6 821 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 HMGN2P46Q86SG4 172 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 DNAJB8Q8NHS0 232 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 NUS1Q96E22 293 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 ASB3Q9Y575 518 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 PITPNM1O00562 1244 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 NME4O00746 187 aa16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 PABPC4LP0CB38 370 aaKnown RBP16.64■□□□□ 0.25
SLC1A4-201ENST00000234256 CRISP3P54108 245 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms