RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Fip1l1Q9D824 581 aaKnown RBP14.33□□□□□ -0.12
Nup88-202ENSMUST00000108530 ItpaQ9D892 198 aa14.33□□□□□ -0.12
Nup88-202ENSMUST00000108530 Hm13Q9D8V0 378 aa14.33□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr316A0A0N4SVP2 306 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Man1b1A2AJ15 658 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 GsnP13020 780 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Cyp2a4P15392 494 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Cyp2a5P20852 494 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Grik2P39087 908 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Guca1aP43081 202 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Defa8P50706 81 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Clec4fP70194 548 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Fam98aQ3TJZ6 515 aaKnown RBP14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr318Q5NCD7 306 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Fam71bQ5STT6 665 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Usp7Q6A4J8 1103 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 ZfatQ7TS63 1237 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gramd1bQ80TI0 738 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Actr5Q80US4 605 aaKnown RBP14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Lrrc8dQ8BGR2 859 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Tyw3Q8BSA9 257 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Slc44a2Q8BY89 706 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Fbxl3Q8C4V4 428 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Arel1Q8CHG5 823 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Vmn1r84Q8R284 318 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Chrna3Q8R4G9 499 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr1176Q8VG40 315 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Adgre4Q91ZE5 689 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 ArhgdiaQ99PT1 204 aaKnown RBP14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 FopnlQ9CZS3 174 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Yae1d1Q9DAY6 216 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gm43518A0A0G2JGB6 165 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gm43302L7N1X8 611 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Vmn2r61L7N2B8 865 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Sbk2P0C5K1 362 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ceacam1P31809 521 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ppp2cbP62715 309 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ppp2caP63330 309 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gbp10Q000W5 611 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Sgo2Q7TSY8 1164 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 C2cd4bQ80XU5 340 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Kcns3Q8BQZ8 491 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Prdm8Q8BZ97 687 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Agr3Q8R3W7 165 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ceacam2Q925P2 520 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ndufv2Q9D6J6 248 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Abt1Q9QYL7 269 aaKnown RBP14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 VarsQ9Z1Q9 1263 aaKnown RBP14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 HnrnpcQ9Z204 313 aaKnown RBP14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Bscl2Q9Z2E9 383 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 CorinQ9Z319 1113 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gm9573F7C950 1606 aa14.32□□□□□ -0.12
Nup88-202ENSMUST00000108530 Vmn1r169L7N275 304 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Csf2rbP26955 896 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 BckdhaP50136 442 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ccr3P51678 359 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Trpc1Q61056 793 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Bnip1Q6QD59 228 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr1085Q7TR64 313 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Lrrtm4Q80XG9 590 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Znf770Q8BIQ8 705 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Eme1Q8BJW7 570 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Defb22Q8BVC1 179 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Piwil4Q8CGT6 848 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Mterf1aQ8CHZ9 379 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gtf2h3Q8VD76 309 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Lcn9Q9D267 178 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Rhobtb1Q9DAK3 695 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Dgat2Q9DCV3 388 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Cbll1Q9JIY2 491 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Mfap5Q9QZJ6 164 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 R3hdmlA2A5I3 253 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gp5O08742 567 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ap1g1P22892 822 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 PamP97467 979 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Hdgfl2Q3UMU9 669 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Heatr6Q6P1G0 1184 aaKnown RBP14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Kcnk12Q76M80 430 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Mettl20Q80ZM3 255 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Lair1Q8BG84 263 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Q8BGK9 164 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 GanabQ8BHN3 944 aaKnown RBP14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Cd99l2Q8BIF0 237 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Tmem62Q8BXJ9 643 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ccm2Q8K2Y9 453 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Zdhhc5Q8VDZ4 715 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr1Q8VGI1 314 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Pinx1Q9CZX5 332 aaKnown RBP14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 CtszQ9WUU7 306 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gsk3bQ9WV60 420 aa14.31□□□□□ -0.12
Nup88-202ENSMUST00000108530 Tet2Q4JK59 1912 aaKnown RBP14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 A6H6Q4 206 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gstm6O35660 218 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Sap18O55128 153 aaKnown RBP14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Cyp21P03940 487 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gnao1P18872 354 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 PthlhP22858 175 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Htr5bP31387 370 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Slc1a5P51912 553 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gpsm3Q3U1Z5 159 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms