RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 FOXE1O00358 373 aaPredicted RBP13.31□□□□□ -0.28
TPM1-215ENST00000558868 STK25O00506 426 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 CFLARO15519 480 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 RASGRP1O95267 797 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 PCNAP12004 261 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 CD22P20273 847 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 VARSP26640 1264 aaKnown RBP13.31□□□□□ -0.28
TPM1-215ENST00000558868 SERPINB1P30740 379 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 RPS9P46781 194 aaKnown RBP13.31□□□□□ -0.28
TPM1-215ENST00000558868 RAB28P51157 221 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 NEK2P51955 445 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 CLNS1AP54105 237 aaKnown RBP13.31□□□□□ -0.28
TPM1-215ENST00000558868 MTTPP55157 894 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 UFM1P61960 85 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 ILF3Q12906 894 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM1-215ENST00000558868 GAS6Q14393 721 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 SLBPQ14493 270 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM1-215ENST00000558868 RPE65Q16518 533 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 SPATS1Q496A3 300 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 C1orf146Q5VVC0 180 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 SUSD1Q6UWL2 747 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 PRR23BQ6ZRT6 265 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 LAS2Q8IYD9 372 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 CADM4Q8NFZ8 388 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 OR7G3Q8NG95 312 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 OR2L8Q8NGY9 312 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 PROKR1Q8TCW9 393 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 CLDN23Q96B33 292 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 BIRC7Q96CA5 298 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 PDXPQ96GD0 296 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 IL17FQ96PD4 163 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 CDRT15Q96T59 188 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 DPY30Q9C005 99 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 FOXQ1Q9C009 403 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 KIR3DX1Q9H7L2 352 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 SPATA6Q9NWH7 488 aaPredicted RBP13.31□□□□□ -0.28
TPM1-215ENST00000558868 SLC7A8Q9UHI5 535 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 PLAGL1Q9UM63 463 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 RUVBL1Q9Y265 456 aaKnown RBP13.31□□□□□ -0.28
TPM1-215ENST00000558868 CA5BQ9Y2D0 317 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 PLEKHM1Q9Y4G2 1056 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 CFAP20Q9Y6A4 193 aaKnown RBP13.31□□□□□ -0.28
TPM1-215ENST00000558868 DOCK9Q9BZ29 2069 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 WDFY4Q6ZS81 3184 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 A8MUI8 341 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 H0Y8X5 98 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 EEDO75530 441 aaKnown RBP13.3□□□□□ -0.28
TPM1-215ENST00000558868 CCNDBP1O95273 360 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 CD1EP15812 388 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 AMD1P17707 334 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 CAPN3P20807 821 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 PKLRP30613 574 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 PIK3CBP42338 1070 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 BLKP51451 505 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 CCR8P51685 355 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 KPNB1Q14974 876 aaKnown RBP13.3□□□□□ -0.28
TPM1-215ENST00000558868 CLCA4Q14CN2 919 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 KIAA0040Q15053 153 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 ALG11Q2TAA5 492 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 VPS26BQ4G0F5 336 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 USP39Q53GS9 565 aaKnown RBP13.3□□□□□ -0.28
TPM1-215ENST00000558868 SPIN4Q56A73 249 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 RD3Q7Z3Z2 195 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 HID1Q8IV36 788 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 LIX1Q8N485 282 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 PJA1Q8NG27 643 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 OR13H1Q8NG92 308 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 STARD8Q92502 1023 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 JADE3Q92613 823 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 TSACCQ96A04 125 aaPredicted RBP13.3□□□□□ -0.28
TPM1-215ENST00000558868 CLPTM1LQ96KA5 538 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 FCRL1Q96LA6 429 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 AIF1LQ9BQI0 150 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 MENTQ9BUN1 341 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 GSDMCQ9BYG8 508 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 DCLRE1BQ9H816 532 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 NT5DC2Q9H857 520 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 EBF2Q9HAK2 575 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 SPAG4Q9NPE6 437 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 PRDM8Q9NQV8 689 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 GEMIN8Q9NWZ8 242 aaKnown RBP13.3□□□□□ -0.28
TPM1-215ENST00000558868 PPT2Q9UMR5 302 aa13.3□□□□□ -0.28
TPM1-215ENST00000558868 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.3□□□□□ -0.28
TPM1-215ENST00000558868 C15orf38-AP3S2A0A0A6YYH1 394 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 PIPSLA2A3N6 862 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 TRIM38O00635 465 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ANKRD28O15084 1053 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 PRMT3O60678 531 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 IL6P05231 212 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 THEGLP0DJG4 465 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 BCKDHAP12694 445 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ME2P23368 584 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 HRH2P25021 359 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 CD27P26842 260 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 SHMT2P34897 504 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ACTR1BP42025 376 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 CLDN8P56748 225 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ACTR3P61158 418 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ACTR1AP61163 376 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ABATP80404 500 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1211.1 ms