RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SERPINB1P30740 379 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 CRISP3P54108 245 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 FAM156AQ8NDB6 213 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 RASSF5Q8WWW0 418 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 C19orf25Q9UFG5 118 aaPredicted RBP16.85■□□□□ 0.29
PTPN21-208ENST00000556564 IKZF2Q9UKS7 526 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 USP54Q70EL1 1684 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 FEZF1A0PJY2 475 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 TRIM24O15164 1050 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 LILRB3O75022 631 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 CXCL12P48061 93 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 TCEAL1Q15170 157 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 HTR3DQ70Z44 454 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 IL22RA1Q8N6P7 574 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 SLC38A4Q969I6 547 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 MARF1Q9Y4F3 1742 aaKnown RBP16.85■□□□□ 0.29
PTPN21-208ENST00000556564 APBB3O95704 486 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 SPINT3P49223 89 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 NEK5Q6P3R8 708 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 ABRAXAS1Q6UWZ7 409 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 IZUMO1Q8IYV9 350 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 MYLIPQ8WY64 445 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 DCUN1D5Q9BTE7 237 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 RNPEPL1Q9HAU8 725 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 PRSS56P0CW18 603 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 METTL21CQ5VZV1 264 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 ZNF57Q68EA5 555 aaPredicted RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 ANKRD54Q6NXT1 300 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 SMARCD3Q6STE5 483 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 UXS1Q8NBZ7 420 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 TOE1Q96GM8 510 aaKnown RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 ZBP1Q9H171 429 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 MCCC2Q9HCC0 563 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 GSTK1Q9Y2Q3 226 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 MYH9P35579 1960 aaKnown RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 BTN3A3O00478 584 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 ST13P50502 369 aaKnown RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 PDZK1Q5T2W1 519 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 SLC36A4Q6YBV0 504 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 OAFQ86UD1 273 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 FAM155AB1AL88 458 aaPredicted RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 SMAD6O43541 496 aaKnown RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 CYP17A1P05093 508 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 NELFEP18615 380 aaKnown RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 CLDN2P57739 230 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 GANABQ14697 944 aaKnown RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 EMC10Q5UCC4 262 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 ZC3H14Q6PJT7 736 aaKnown RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 HIPK1Q86Z02 1210 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 GHDCQ8N2G8 530 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 SLC29A3Q9BZD2 475 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 NEK6Q9HC98 313 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 FZD4Q9ULV1 537 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 HNRNPA2B1P22626 353 aaKnown RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 GRK6P43250 576 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 TANGO2Q6ICL3 276 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 AMIGO1Q86WK6 493 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 RLN3Q8WXF3 142 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 METTL7AQ9H8H3 244 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 MARCH4Q9P2E8 410 aaPredicted RBP16.84■□□□□ 0.29
PTPN21-208ENST00000556564 FAM149AA5PLN7 773 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 GSC2O15499 205 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 BCL10O95999 233 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 TRAF3Q13114 568 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 NFE2L1Q14494 772 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 PDE7BQ9NP56 450 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 DMTF1Q9Y222 760 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 PAPPAQ13219 1627 aa16.84■□□□□ 0.29
PTPN21-208ENST00000556564 ECM29Q5VYK3 1845 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 IGFBP5P24593 272 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 SLC7A1P30825 629 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 PCDH1Q08174 1060 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 RFX4Q33E94 735 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 C1orf189Q5VU69 101 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 NUP54Q7Z3B4 507 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 AGAP11Q8TF27 550 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 TRMT2BQ96GJ1 504 aaKnown RBP16.83■□□□□ 0.29
PTPN21-208ENST00000556564 RASSF1Q9NS23 344 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 LAMB1P07942 1786 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 SCDO00767 359 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 MGRN1O60291 552 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 COQ9O75208 318 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 ENGP17813 658 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 DGKQP52824 942 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 PGGT1BP53609 377 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 TMEM240Q5SV17 173 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 ROPN1LQ96C74 230 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 C11orf16Q9NQ32 467 aa16.83■□□□□ 0.29
PTPN21-208ENST00000556564 OR5K4A6NMS3 321 aa16.83■□□□□ 0.28
PTPN21-208ENST00000556564 MFN2O95140 757 aa16.83■□□□□ 0.28
PTPN21-208ENST00000556564 FBLP22087 321 aaKnown RBP16.83■□□□□ 0.28
PTPN21-208ENST00000556564 PTDSS1P48651 473 aaKnown RBP16.83■□□□□ 0.28
PTPN21-208ENST00000556564 HHEXQ03014 270 aa16.83■□□□□ 0.28
PTPN21-208ENST00000556564 SLC44A4Q53GD3 710 aa16.83■□□□□ 0.28
PTPN21-208ENST00000556564 CEP78Q5JTW2 689 aa16.83■□□□□ 0.28
PTPN21-208ENST00000556564 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.83■□□□□ 0.28
PTPN21-208ENST00000556564 DDI2Q5TDH0 399 aa16.83■□□□□ 0.28
PTPN21-208ENST00000556564 TRIQKQ629K1 86 aa16.83■□□□□ 0.28
PTPN21-208ENST00000556564 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.83■□□□□ 0.28
PTPN21-208ENST00000556564 ZNF624Q9P2J8 865 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms