RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 MLXIPLQ9NP71 852 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 NSMCE4AQ9NXX6 385 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 WHRNQ9P202 907 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 ZFATQ9P243 1243 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 TAC3Q9UHF0 121 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 CDC14AQ9UNH5 594 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 VWA7Q9Y334 891 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 CCDC88CQ9P219 2028 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 PABPN1LA6NDY0 278 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 FANCGO15287 622 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 TP73O15350 636 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 CEACAM4O75871 244 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 DNAJB5O75953 348 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 WISP1O95388 367 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 ITGAXP20702 1163 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 CCND1P24385 295 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 OTX2P32243 289 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 RPL21P46778 160 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 CSRP3P50461 194 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 PGDP52209 483 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 TIAL1Q01085 375 aaKnown RBP eCLIP12.57□□□□□ -0.41e-6■■□□□ 13.9
HNRNPC-205ENST00000553300 KCNC4Q03721 635 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 MGAT5Q09328 741 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 PDIA2Q13087 525 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 GARNL3Q5VVW2 1013 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 FRMPD2BQ6IN97 320 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 ZNF425Q6IV72 752 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 PAQR7Q86WK9 346 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 LRRC56Q8IYG6 542 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 RERGQ96A58 199 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 MVB12AQ96EY5 273 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 VPS50Q96JG6 964 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 PWWP2AQ96N64 755 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 TRIM54Q9BYV2 358 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 PLAC1Q9HBJ0 212 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 SLC6A20Q9NP91 592 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 CCDC177Q9NQR7 707 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 SLC22A11Q9NSA0 550 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 TMEM184CQ9NVA4 438 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 MOCS1Q9NZB8 636 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 SNX24Q9Y343 169 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 TENM4Q6N022 2769 aa12.57□□□□□ -0.4
HNRNPC-205ENST00000553300 LOC105369274A0A096LPK9 316 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 LOC102723532A0A0G2JNH3 316 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 H0YGG7 62 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 EIF3HO15372 352 aaKnown RBP eCLIP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 PRPF4O43172 522 aaKnown RBP eCLIP12.56□□□□□ -0.41e-7■□□□□ 8.5
HNRNPC-205ENST00000553300 EIF2S1P05198 315 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 FDXRP22570 491 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 IMPA1P29218 277 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 CDKN2DP55273 166 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 AP1S2P56377 157 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ARF3P61204 181 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ATP1A4Q13733 1029 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 HP1BP3Q5SSJ5 553 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 RBM20Q5T481 1227 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 HECTD2Q5U5R9 776 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 FAM69BQ5VUD6 431 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 CPZQ66K79 652 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 TRMT10BQ6PF06 316 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 MRGPREQ86SM8 312 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 SLC26A11Q86WA9 606 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ANKMY2Q8IV38 441 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 OR4N4Q8N0Y3 316 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 GPATCH11Q8N954 259 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 CLEC1AQ8NC01 280 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 PPFIBP2Q8ND30 876 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 FBXO36Q8NEA4 188 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 PYROXD1Q8WU10 500 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ANKRD7Q92527 254 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 PDLIM5Q96HC4 596 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 OR2A5Q96R48 311 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 FAM129AQ9BZQ8 928 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ZNF304Q9HCX3 659 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 PDE10AQ9Y233 779 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 UTP11Q9Y3A2 253 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ZNF451Q9Y4E5 1061 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 MDC1Q14676 2089 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 NBASA2RRP1 2371 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 RP1L1Q8IWN7 2480 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 SPENQ96T58 3664 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 IGKV1-8A0A0C4DH67 115 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ENO2P09104 434 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 MMP11P24347 488 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 SOX8P57073 446 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 YBX1P67809 324 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 CAV1Q03135 178 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 OCA2Q04671 838 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 TLE1Q04724 770 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 CHAF1BQ13112 559 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 SLC9A5Q14940 896 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 NKG7Q16617 165 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 PRTGQ2VWP7 1150 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 AGTRAPQ6RW13 159 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 CYS1Q717R9 158 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ADCK2Q7Z695 626 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ZBED8Q8IZ13 594 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ATL1Q8WXF7 558 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 COL26A1Q96A83 441 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms