RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 CTAGE9A4FU28 777 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 HNRNPRO43390 633 aaKnown RBP10.93□□□□□ -0.66
RAB5C-203ENST00000546881 WFS1O76024 890 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 USP1O94782 785 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 HEXBP07686 556 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 ZSCAN5DPP0CG00 497 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 NMBRP28336 390 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 FMO4P31512 558 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 CCNFP41002 786 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 EMP2P54851 167 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 OASLQ15646 514 aaKnown RBP10.93□□□□□ -0.66
RAB5C-203ENST00000546881 SP5Q6BEB4 398 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-203ENST00000546881 RNF44Q7L0R7 432 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 NDUFAF7Q7L592 441 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 LAPTM4BQ86VI4 370 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 C17orf53Q8N3J3 647 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-203ENST00000546881 OR2A1Q8NGT9 310 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 MAGEC3Q8TD91 643 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 C10orf90Q96M02 699 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 OSBPL9Q96SU4 736 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 NAPGQ99747 312 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-203ENST00000546881 ZFYVE21Q9BQ24 234 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 SLX1AQ9BQ83 275 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 P2RY12Q9H244 342 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 SPATA7Q9P0W8 599 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 PAK5Q9P286 719 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 COPG2Q9UBF2 871 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 TRAV17A0A0B4J275 112 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 GOLGA6L10A0A0M3HER8 536 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 A0A1W2PPV9 198 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 IDSB3KWA1 339 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 GOLGA8KD6RF30 607 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 H0YGG7 62 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 GOLGA8TH3BQL2 631 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 PGRMC1O00264 195 aaKnown RBP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 PRPF4O43172 522 aaKnown RBP eCLIP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 NIPSNAP2O75323 286 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 VPS26AO75436 327 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 CELA2AP08217 269 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 ANXA5P08758 320 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 PRR35P0CG20 571 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 COX6A1P12074 109 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 PRF1P14222 555 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 CHRM3P20309 590 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 RPA3P35244 121 aaPredicted RBP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 TERF1P54274 439 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 ARF3P61204 181 aaPredicted RBP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 BASP1P80723 227 aaKnown RBP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 SRSF11Q05519 484 aaKnown RBP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 NAA25Q14CX7 972 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 HKDC1Q2TB90 917 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 CTSL3PQ5NE16 218 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 ATG9BQ674R7 924 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 SUSD1Q6UWL2 747 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 CES3Q6UWW8 571 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 GFRALQ6UXV0 394 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 SDCCAG8Q86SQ7 713 aaPredicted RBP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 LRRC6Q86X45 466 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 CSNK1A1LQ8N752 337 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 HMGCLL1Q8TB92 370 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 PEX13Q92968 403 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 MOCOSQ96EN8 888 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 MMABQ96EY8 250 aaPredicted RBP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 MS4A14Q96JA4 679 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 UNKQ9C0B0 810 aaKnown RBP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 MRPS30Q9NP92 439 aaKnown RBP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 HOMER3Q9NSC5 361 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 BFARQ9NZS9 450 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 SH3BGRL2Q9UJC5 107 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 SNX12Q9UMY4 172 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 CDC14AQ9UNH5 594 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 ENTPD4Q9Y227 616 aa10.92□□□□□ -0.66
RAB5C-203ENST00000546881 RUVBL1Q9Y265 456 aaKnown RBP10.92□□□□□ -0.66
RAB5C-203ENST00000546881 CELSR2Q9HCU4 2923 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 TRGV8A0A0C4DH27 118 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 OR2A25A4D2G3 310 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 ESPNB1AK53 854 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 VAPBO95292 243 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 SERPINA7P05543 415 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 STSP08842 583 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 TCP1P17987 556 aaKnown RBP10.91□□□□□ -0.66
RAB5C-203ENST00000546881 RPS3P23396 243 aaKnown RBP eCLIP10.91□□□□□ -0.668e-7■■□□□ 11.4
RAB5C-203ENST00000546881 MGAT1P26572 445 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 RPL22P35268 128 aaKnown RBP10.91□□□□□ -0.66
RAB5C-203ENST00000546881 TNFSF10P50591 281 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 DSG2Q14126 1118 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 CCNG2Q16589 344 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 ANKRD20A4Q4UJ75 823 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 RPUSD3Q6P087 351 aaKnown RBP10.91□□□□□ -0.66
RAB5C-203ENST00000546881 FBXO42Q6P3S6 717 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 ADCK2Q7Z695 626 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 MCEMP1Q8IX19 187 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 MPP5Q8N3R9 675 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 OR9A1PQ8NGU1 263 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 SMPDL3AQ92484 453 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 NR4A3Q92570 626 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 RERGQ96A58 199 aaPredicted RBP10.91□□□□□ -0.66
RAB5C-203ENST00000546881 CAPZA3Q96KX2 299 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 PHF12Q96QT6 1004 aa10.91□□□□□ -0.66
RAB5C-203ENST00000546881 TAAR6Q96RI8 345 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms