RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 IGHV3-20A0A0C4DH32 117 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 TRBV4-1A0A0J9YWV2 114 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 PINLYPA6NC86 204 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 NPIPB15A6NHN6 443 aaPredicted RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 F8VVB4 439 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 F8VWA3 439 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 EIF3FO00303 357 aaPredicted RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 SLC1A7O00341 560 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 FPGTO14772 594 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 SCO2O43819 266 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 HS6ST1O60243 411 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 DFNA5O60443 496 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 TSPAN1O60635 241 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 MTRF1O75570 445 aaKnown RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 KBTBD11O94819 623 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 EIF2S1P05198 315 aaKnown RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 SMIM18P0DKX4 95 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 ADORA3P0DMS8 318 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 GP1BBP13224 206 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 HNRNPA2B1P22626 353 aaKnown RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 CNTFP26441 200 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 PBX3P40426 434 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 SLC9A3P48764 834 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 HARS2P49590 506 aaKnown RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 GSK3BP49841 420 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 MEOX2P50222 304 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 ARSEP51690 589 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 LMOD3Q0VAK6 560 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 IKQ13123 557 aaPredicted RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 TRA2AQ13595 282 aaKnown RBP eCLIP0.47□□□□□ -2.33
COPB1-212ENST00000534771 NR1D2Q14995 579 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 TAF12Q16514 161 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 UPP1Q16831 310 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 ISXQ2M1V0 245 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 GRAMD1BQ3KR37 738 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 ALDH1L2Q3SY69 923 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 FAM98BQ52LJ0 330 aaKnown RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 TFDP3Q5H9I0 405 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 NHLRC3Q5JS37 347 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 ZNF506Q5JVG8 444 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 C11orf63Q6NUN7 778 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 IRGCQ6NXR0 463 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 FIGLAQ6QHK4 219 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 FCRLAQ7L513 359 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 LRRC49Q8IUZ0 686 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 ANKRD18AQ8IVF6 992 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 MCEMP1Q8IX19 187 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 CEP57L1Q8IYX8 460 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 SCYL3Q8IZE3 742 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 GPC2Q8N158 579 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 PCYOX1LQ8NBM8 494 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 OR2AJ1Q8NGZ0 328 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 TDRD7Q8NHU6 1098 aaKnown RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 ARHGEF2Q92974 986 aaKnown RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 ELMOD3Q96FG2 381 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 PPP1R16AQ96I34 528 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 C4orf45Q96LM5 186 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 MAGEB18Q96M61 343 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 TAAR6Q96RI8 345 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 RPS6KC1Q96S38 1066 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 MAK16Q9BXY0 300 aaKnown RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 DEFB126Q9BYW3 111 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 PANK2Q9BZ23 570 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 PLA2G12AQ9BZM1 189 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 DPAGT1Q9H3H5 408 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 PAG1Q9NWQ8 432 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 TAS2R14Q9NYV8 317 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 EHD2Q9NZN4 543 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 DHRS4-AS1Q9P1J3 65 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 ZNF282Q9UDV7 671 aaPredicted RBP0.47□□□□□ -2.33
COPB1-212ENST00000534771 PRDM4Q9UKN5 801 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 RAB26Q9ULW5 256 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 GRIP1Q9Y3R0 1128 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 CMAHPQ9Y471 501 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 NME7Q9Y5B8 376 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 MEGF6O75095 1541 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 ARID2Q68CP9 1835 aa0.47□□□□□ -2.33
COPB1-212ENST00000534771 IGSF1Q8N6C5 1336 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 TRGV8A0A0C4DH27 118 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 TRBV5-5A0A0J9YX44 114 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 PANO1I0J062 215 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 HOXC11O43248 304 aaPredicted RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 MED24O75448 989 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 STAM2O75886 525 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 WISP3O95389 354 aaPredicted RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 ACTL6AO96019 429 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 POLBP06746 335 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 SRPRAP08240 638 aaKnown RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 ATP1A3P13637 1013 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 RPS2P15880 293 aaKnown RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 ACHEP22303 614 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 AADACP22760 399 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 EDNRAP25101 427 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 FASP25445 335 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 GABRA5P31644 462 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 BSGP35613 385 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 DCDC1P59894 354 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 CDK3Q00526 305 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 LRRC63Q05C16 580 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 KLC1Q07866 573 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms