RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 ANKRD12Q6UB98 2062 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 LRRK2Q5S007 2527 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 DOPEY2Q9Y3R5 2298 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 IGKV1-8A0A0C4DH67 115 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 GOLGA6L10A0A0M3HER8 536 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 E7ENX8 843 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 H0YGG7 62 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 GFYI3L273 518 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 ZBTB14O43829 449 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 ARF3P61204 181 aaPredicted RBP18.81■□□□□ 0.6
SFXN1-203ENST00000502393 TAP2Q03519 686 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 RELAQ04206 551 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 CUL1Q13616 776 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 TSTA3Q13630 321 aaPredicted RBP18.81■□□□□ 0.6
SFXN1-203ENST00000502393 RBBP7Q16576 425 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 TUBB8Q3ZCM7 444 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 IRAK1BP1Q5VVH5 260 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 ZNF425Q6IV72 752 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 CYHR1Q6ZMK1 362 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 Q6ZS92 163 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 AGGF1Q8N302 714 aaeCLIP18.81■□□□□ 0.69e-7■■■□□ 14.8
SFXN1-203ENST00000502393 STT3BQ8TCJ2 826 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 ZNF480Q8WV37 535 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 MIEF2Q96C03 454 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 SNRNP40Q96DI7 357 aaKnown RBP18.81■□□□□ 0.6
SFXN1-203ENST00000502393 MVB12AQ96EY5 273 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 CABS1Q96KC9 395 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 C10orf90Q96M02 699 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 ILKAPQ9H0C8 392 aaPredicted RBP18.81■□□□□ 0.6
SFXN1-203ENST00000502393 TAC3Q9UHF0 121 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 CDC14AQ9UNH5 594 aa18.81■□□□□ 0.6
SFXN1-203ENST00000502393 NUP210LQ5VU65 1888 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 PCM1Q15154 2024 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 IGLV3-12A0A075B6K2 115 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 BLACEA4D250 179 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 EIF3FO00303 357 aaPredicted RBP18.8■□□□□ 0.6
SFXN1-203ENST00000502393 CES2O00748 559 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 HAUS5O94927 633 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 AGFG2O95081 481 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 F7P08709 466 aaPredicted RBP18.8■□□□□ 0.6
SFXN1-203ENST00000502393 ZGLP1P0C6A0 271 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 EZRP15311 586 aaKnown RBP18.8■□□□□ 0.6
SFXN1-203ENST00000502393 SKIV2L2P42285 1042 aaKnown RBP18.8■□□□□ 0.6
SFXN1-203ENST00000502393 ABATP80404 500 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 KLC1Q07866 573 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 AGAP7PQ5VUJ5 663 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 CSNK1A1LQ8N752 337 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.8■□□□□ 0.6
SFXN1-203ENST00000502393 PPFIBP2Q8ND30 876 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 OR11G2Q8NGC1 345 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 CD200R1Q8TD46 325 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 C19orf60Q96EN9 201 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 AGAP4Q96P64 663 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 GPR21Q99679 349 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 FAM167BQ9BTA0 163 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 CRB3Q9BUF7 120 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 ZBTB20Q9HC78 741 aaPredicted RBP18.8■□□□□ 0.6
SFXN1-203ENST00000502393 LRRC4CQ9HCJ2 640 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 FBXO5Q9UKT4 447 aa18.8■□□□□ 0.6
SFXN1-203ENST00000502393 PRRC2CQ9Y520 2896 aaKnown RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 TXNDC9O14530 226 aa18.79■□□□□ 0.6
SFXN1-203ENST00000502393 PRPF4O43172 522 aaKnown RBP eCLIP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 SYF2O95926 243 aaKnown RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 FBLP22087 321 aaKnown RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 HSP90AA5PQ58FG0 334 aa18.79■□□□□ 0.6
SFXN1-203ENST00000502393 RNASEH2BQ5TBB1 312 aaKnown RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 GARNL3Q5VVW2 1013 aa18.79■□□□□ 0.6
SFXN1-203ENST00000502393 IGFL2Q6UWQ7 119 aa18.79■□□□□ 0.6
SFXN1-203ENST00000502393 SLC35F6Q8N357 371 aa18.79■□□□□ 0.6
SFXN1-203ENST00000502393 CISD2Q8N5K1 135 aaKnown RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 RERGQ96A58 199 aaPredicted RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 OR2A5Q96R48 311 aa18.79■□□□□ 0.6
SFXN1-203ENST00000502393 EBNA1BP2Q99848 306 aaKnown RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 AARSD1Q9BTE6 412 aaKnown RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 LHPPQ9H008 270 aa18.79■□□□□ 0.6
SFXN1-203ENST00000502393 CUEDC1Q9NWM3 386 aaPredicted RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 STOX2Q9P2F5 926 aaPredicted RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 C3orf18Q9UK00 162 aa18.79■□□□□ 0.6
SFXN1-203ENST00000502393 RUVBL1Q9Y265 456 aaKnown RBP18.79■□□□□ 0.6
SFXN1-203ENST00000502393 SHANK1Q9Y566 2161 aa18.79■□□□□ 0.6
SFXN1-203ENST00000502393 SMAPO00193 183 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 ZSCAN12O43309 604 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 ALOX12BO75342 701 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 PGAM1P18669 254 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 MPP1Q00013 466 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 PTK6Q13882 451 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 DSG2Q14126 1118 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 PPP1R7Q15435 360 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 CRB2Q5IJ48 1285 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 LRRC8EQ6NSJ5 796 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 UGT3A1Q6NUS8 523 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 UBE2R2Q712K3 238 aaPredicted RBP18.78■□□□□ 0.6
SFXN1-203ENST00000502393 KCNMB4Q86W47 210 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 PARP9Q8IXQ6 854 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 LRRC56Q8IYG6 542 aaPredicted RBP18.78■□□□□ 0.6
SFXN1-203ENST00000502393 C2CD4AQ8NCU7 369 aaPredicted RBP18.78■□□□□ 0.6
SFXN1-203ENST00000502393 GABPB2Q8TAK5 448 aaPredicted RBP18.78■□□□□ 0.6
SFXN1-203ENST00000502393 PPP4R1Q8TF05 950 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 WDR77Q9BQA1 342 aaPredicted RBP18.78■□□□□ 0.6
SFXN1-203ENST00000502393 IARS2Q9NSE4 1012 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms