RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ACTR1AP61163 376 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 SPANXN4Q5MJ08 99 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 AGTRAPQ6RW13 159 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 ADGRG2Q8IZP9 1017 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 OR13J1Q8NGT2 312 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 OR52J3Q8NH60 311 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 TMBIM1Q969X1 311 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 FAIM2Q9BWQ8 316 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 TOR3AQ9H497 397 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 WDR26Q9H7D7 661 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 CARS2Q9HA77 564 aaKnown RBP11□□□□□ -0.65
SMPD4-218ENST00000482171 ITM2CQ9NQX7 267 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 SMOXQ9NWM0 555 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 PDP1Q9P0J1 537 aaPredicted RBP11□□□□□ -0.65
SMPD4-218ENST00000482171 TMED5Q9Y3A6 229 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 DRGXA6NNA5 263 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 HEPACAM2A8MVW5 462 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 MYL12BO14950 172 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 TULP3O75386 442 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 PDE9AO76083 593 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 ACADVLP49748 655 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 MAPK12P53778 367 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 HSPB3Q12988 150 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 SEMA3BQ13214 749 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 MEP1AQ16819 746 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 FRG2Q64ET8 278 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 OR4F3Q6IEY1 312 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 SYVN1Q86TM6 617 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 PIK3C3Q8NEB9 887 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 VANGL1Q8TAA9 524 aaPredicted RBP11□□□□□ -0.65
SMPD4-218ENST00000482171 MZB1Q8WU39 189 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 SIPA1Q96FS4 1042 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 RIPOR3Q96MK2 946 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 FRG2BQ96QU4 278 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 KAT8Q9H7Z6 458 aaKnown RBP11□□□□□ -0.65
SMPD4-218ENST00000482171 GULP1Q9UBP9 304 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 hCG_2039718K7EN88 272 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 SUV39H1O43463 412 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 GABRB3P28472 473 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 CCR4P51679 360 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 SRP54P61011 504 aaKnown RBP11□□□□□ -0.65
SMPD4-218ENST00000482171 SH3BP2P78314 561 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 PHC1P78364 1004 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 LRRC26Q2I0M4 334 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 PIGGQ5H8A4 983 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 C9orf64Q5T6V5 341 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 LHX8Q68G74 356 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 TRIM40Q6P9F5 258 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 R3HCC1LQ7Z5L2 792 aaKnown RBP11□□□□□ -0.65
SMPD4-218ENST00000482171 PGBD5Q8N414 524 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 C1orf52Q8N6N3 182 aaKnown RBP11□□□□□ -0.65
SMPD4-218ENST00000482171 ZCCHC10Q8TBK6 192 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 LCN9Q8WX39 176 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 USP7Q93009 1102 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 BIRC8Q96P09 236 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 TRIT1Q9H3H1 467 aaKnown RBP11□□□□□ -0.65
SMPD4-218ENST00000482171 FBXW2Q9UKT8 454 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 AP3M1Q9Y2T2 418 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 FAM234BA2RU67 622 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 NPIPB15A6NHN6 443 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 SOCS2O14508 198 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 GUCY1B2O75343 617 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 VIPP01282 170 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 HOXD9P28356 352 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 BUD31P41223 144 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 FAM189BP81408 668 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 ARF5P84085 180 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 CASP12Q6UXS9 341 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 DEF8Q6ZN54 512 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF420Q8TAQ5 688 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 RNFT2Q96EX2 444 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 HHIPL1Q96JK4 782 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 RANBP9Q96S59 729 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 SPRTNQ9H040 489 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 IL26Q9NPH9 171 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 TMEM9Q9P0T7 183 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 GOLGB1Q14789 3259 aaKnown RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 SAGE2PA6NJ88 616 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 FAM155AB1AL88 458 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 SLC28A2O43868 658 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 IFNA16P05015 189 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 CD36P16671 472 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF8P17098 575 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 FDXRP22570 491 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 KELP23276 732 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 TALDO1P37837 337 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 CENPAP49450 140 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 ERVFC1P60507 584 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 SPIBQ01892 262 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 SEMA3AQ14563 771 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 QPRTQ15274 297 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 PHKG1Q16816 387 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 PYDC2Q56P42 97 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 C6orf136Q5SQH8 315 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 ENPP7Q6UWV6 458 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF783Q6ZMS7 281 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 SLC15A4Q8N697 577 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 FIBINQ8TAL6 211 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 PHF10Q8WUB8 498 aaKnown RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 TFGQ92734 400 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms