RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 PROX2Q3B8N5 592 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 TPRG1LQ5T0D9 272 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 PARP16Q8N5Y8 322 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 ZBTB2Q8N680 514 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CDC26Q8NHZ8 85 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 EFHD2Q96C19 240 aaPredicted RBP11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CDADC1Q9BWV3 514 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 REXO4Q9GZR2 422 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 NACA2Q9H009 215 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 TPK1Q9H3S4 243 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 TAS2R16Q9NYV7 291 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 LHX3Q9UBR4 397 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 Q9Y3F1 56 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 PLXNB3Q9ULL4 1909 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CASP8AP2Q9UKL3 1982 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CLIC1O00299 241 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 YY2O15391 372 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 NUAK1O60285 661 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 STK16O75716 305 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CLDN9O95484 217 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CPSF4O95639 269 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 AKR1A1P14550 325 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 ALOX12P18054 663 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 ATF6P18850 670 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 TNFRSF1BP20333 461 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 KDELR2P33947 212 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 MAGEA11P43364 429 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CRYBA2P53672 197 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 TIGD6Q17RP2 521 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 VMACQ2NL98 169 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CXorf57Q6NSI4 855 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 HEATR4Q86WZ0 1026 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 LACC1Q8IV20 430 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 METTL4Q8N3J2 472 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 BHMTQ93088 406 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 Q96MT0 163 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 RMI1Q9H9A7 625 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CCNB1IP1Q9NPC3 277 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 RAD18Q9NS91 495 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 TRMT13Q9NUP7 481 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 ZNF106Q9H2Y7 1883 aaKnown RBP11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 FPGTO14772 594 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 CLDN7O95471 211 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 DGKAP23743 735 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 HMGCLP35914 325 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 CASP3P42574 277 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 FOXD4Q12950 439 aaPredicted RBP11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 ZNF177Q13360 481 aaPredicted RBP11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 TP53BP2Q13625 1128 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 SMU1Q2TAY7 513 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 GPRC6AQ5T6X5 926 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 GLB1LQ6UWU2 654 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 ZNF621Q6ZSS3 439 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 GALNT13Q8IUC8 556 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 ATL1Q8WXF7 558 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 MAL2Q969L2 176 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 TBC1D20Q96BZ9 403 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 PANX1Q96RD7 426 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 PITX2Q99697 317 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 CENPOQ9BU64 300 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 REEP1Q9H902 201 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 SLC6A14Q9UN76 642 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 NOX1Q9Y5S8 564 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 A0A1W2PQ67 120 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 TLL1O43897 1013 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 PRAMEF4O60810 478 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 NTRK1P04629 796 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 CORO1AP31146 461 aaKnown RBP11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 CTSKP43235 329 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 CASP9P55211 416 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 NFATC2Q13469 925 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 ZNF181Q2M3W8 571 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 IQCCQ4KMZ1 466 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 PRAMEF9Q5VWM5 478 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 RGMBQ6NW40 437 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 FAHD1Q6P587 224 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 CYP2U1Q7Z449 544 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 P3H2Q8IVL5 708 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 LINC01599Q8WXQ3 324 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 TTPALQ9BTX7 342 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 MMP27Q9H306 513 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 TP63Q9H3D4 680 aaPredicted RBP11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 IL26Q9NPH9 171 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 GPR83Q9NYM4 423 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 AP3M1Q9Y2T2 418 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 TESMINQ9Y4I5 508 aa11.38□□□□□ -0.59
PDZRN3-203ENST00000462146 ILVBLA1L0T0 632 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 EVPLLA8MZ36 301 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 ASNA1O43681 348 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 FZD6O60353 706 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 KRT6AP02538 564 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 KRT6BP04259 564 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 ZDHHC11BP0C7U3 371 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 RRM2P31350 389 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 KRT6CP48668 564 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 ITGA1P56199 1179 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 DOC2BQ14184 412 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 UGT8Q16880 541 aa11.37□□□□□ -0.59
PDZRN3-203ENST00000462146 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms