RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 FZD2Q14332 565 aa21.3■■□□□ 1
VSX1-205ENST00000429762 ARHGAP19Q14CB8 494 aa21.3■■□□□ 1
VSX1-205ENST00000429762 MED27Q6P2C8 311 aa21.3■■□□□ 1
VSX1-205ENST00000429762 C16orf89Q6UX73 402 aa21.3■■□□□ 1
VSX1-205ENST00000429762 SFTPA2Q8IWL1 248 aa21.3■■□□□ 1
VSX1-205ENST00000429762 CCDC124Q96CT7 223 aaKnown RBP21.3■■□□□ 1
VSX1-205ENST00000429762 APOLD1Q96LR9 279 aa21.3■■□□□ 1
VSX1-205ENST00000429762 SLC39A3Q9BRY0 314 aa21.3■■□□□ 1
VSX1-205ENST00000429762 EBPLQ9BY08 206 aa21.3■■□□□ 1
VSX1-205ENST00000429762 SLC52A3Q9NQ40 469 aa21.3■■□□□ 1
VSX1-205ENST00000429762 GON4LQ3T8J9 2241 aa21.3■■□□□ 1
VSX1-205ENST00000429762 ASPDHA6ND91 283 aa21.3■■□□□ 1
VSX1-205ENST00000429762 ANKRD28O15084 1053 aa21.3■■□□□ 1
VSX1-205ENST00000429762 ATP6V1G2O95670 118 aa21.3■■□□□ 1
VSX1-205ENST00000429762 TNFP01375 233 aa21.3■■□□□ 1
VSX1-205ENST00000429762 POLR2JP52435 117 aaKnown RBP21.3■■□□□ 1
VSX1-205ENST00000429762 TIGD2Q4W5G0 525 aa21.3■■□□□ 1
VSX1-205ENST00000429762 PARP9Q8IXQ6 854 aa21.3■■□□□ 1
VSX1-205ENST00000429762 SETD7Q8WTS6 366 aaKnown RBP21.3■■□□□ 1
VSX1-205ENST00000429762 SMPDL3AQ92484 453 aa21.3■■□□□ 1
VSX1-205ENST00000429762 SPDL1Q96EA4 605 aa21.3■■□□□ 1
VSX1-205ENST00000429762 MMADHCQ9H3L0 296 aaPredicted RBP21.3■■□□□ 1
VSX1-205ENST00000429762 MVB12BQ9H7P6 319 aa21.3■■□□□ 1
VSX1-205ENST00000429762 ZIM2Q9NZV7 527 aa21.3■■□□□ 1
VSX1-205ENST00000429762 ZNF624Q9P2J8 865 aaPredicted RBP21.3■■□□□ 1
VSX1-205ENST00000429762 ENTPD5O75356 428 aa21.29■■□□□ 1
VSX1-205ENST00000429762 WNT1P04628 370 aa21.29■■□□□ 1
VSX1-205ENST00000429762 BCKDHAP12694 445 aa21.29■■□□□ 1
VSX1-205ENST00000429762 CCND1P24385 295 aa21.29■■□□□ 1
VSX1-205ENST00000429762 MRPL19P49406 292 aaKnown RBP21.29■■□□□ 1
VSX1-205ENST00000429762 RAP1GDS1P52306 607 aa21.29■■□□□ 1
VSX1-205ENST00000429762 KCNK10P57789 538 aa21.29■■□□□ 1
VSX1-205ENST00000429762 RPS13P62277 151 aaKnown RBP21.29■■□□□ 1
VSX1-205ENST00000429762 RPL6Q02878 288 aaKnown RBP21.29■■□□□ 1
VSX1-205ENST00000429762 E2F2Q14209 437 aa21.29■■□□□ 1
VSX1-205ENST00000429762 HPS6Q86YV9 775 aa21.29■■□□□ 1
VSX1-205ENST00000429762 KRTCAP2Q8N6L1 136 aa21.29■■□□□ 1
VSX1-205ENST00000429762 RNF148Q8N7C7 305 aa21.29■■□□□ 1
VSX1-205ENST00000429762 PATE1Q8WXA2 126 aa21.29■■□□□ 1
VSX1-205ENST00000429762 WDR34Q96EX3 536 aa21.29■■□□□ 1
VSX1-205ENST00000429762 CMTM7Q96FZ5 175 aa21.29■■□□□ 1
VSX1-205ENST00000429762 KLHDC7BQ96G42 594 aa21.29■■□□□ 1
VSX1-205ENST00000429762 CDRT15Q96T59 188 aa21.29■■□□□ 1
VSX1-205ENST00000429762 HAUS8Q9BT25 410 aa21.29■■□□□ 1
VSX1-205ENST00000429762 MAP10Q9P2G4 905 aa21.29■■□□□ 1
VSX1-205ENST00000429762 PCDHGA11Q9Y5H2 935 aa21.29■■□□□ 1
VSX1-205ENST00000429762 SPTY2D1-AS1A0A0U1RR47 76 aa21.28■■□□□ 1
VSX1-205ENST00000429762 ANGPT2O15123 496 aa21.28■■□□□ 1
VSX1-205ENST00000429762 BCKDHBP21953 392 aa21.28■■□□□ 1
VSX1-205ENST00000429762 TACR1P25103 407 aa21.28■■□□□ 1
VSX1-205ENST00000429762 RAB28P51157 221 aa21.28■■□□□ 1
VSX1-205ENST00000429762 DGKQP52824 942 aa21.28■■□□□ 1
VSX1-205ENST00000429762 CSTF3Q12996 717 aaKnown RBP21.28■■□□□ 1
VSX1-205ENST00000429762 C1orf61Q13536 156 aa21.28■■□□□ 1
VSX1-205ENST00000429762 USP39Q53GS9 565 aaKnown RBP21.28■■□□□ 1
VSX1-205ENST00000429762 ABRAXAS1Q6UWZ7 409 aa21.28■■□□□ 1
VSX1-205ENST00000429762 C17orf64Q86WR6 236 aa21.28■■□□□ 1
VSX1-205ENST00000429762 PGAM4Q8N0Y7 254 aa21.28■■□□□ 1
VSX1-205ENST00000429762 EFCAB11Q9BUY7 163 aa21.28■■□□□ 1
VSX1-205ENST00000429762 MIR1-1HGQ9H1L0 117 aa21.28■■□□□ 1
VSX1-205ENST00000429762 TDRD6O60522 2096 aaKnown RBP21.28■■□□□ 1
VSX1-205ENST00000429762 EML5Q05BV3 1969 aa21.28■■□□□ 1
VSX1-205ENST00000429762 METTL12A8MUP2 240 aa21.28■■□□□ 1
VSX1-205ENST00000429762 AMD1P17707 334 aa21.28■■□□□ 1
VSX1-205ENST00000429762 HSD17B2P37059 387 aa21.28■■□□□ 1
VSX1-205ENST00000429762 PSME3P61289 254 aa21.28■■□□□ 1
VSX1-205ENST00000429762 MAD2L1Q13257 205 aaPredicted RBP21.28■■□□□ 1
VSX1-205ENST00000429762 RCAN2Q14206 197 aa21.28■■□□□ 1
VSX1-205ENST00000429762 CACHD1Q5VU97 1274 aa21.28■■□□□ 1
VSX1-205ENST00000429762 BNC2Q6ZN30 1099 aaPredicted RBP21.28■■□□□ 1
VSX1-205ENST00000429762 RAB42Q8N4Z0 105 aa21.28■■□□□ 1
VSX1-205ENST00000429762 SPATA6Q9NWH7 488 aaPredicted RBP21.28■■□□□ 1
VSX1-205ENST00000429762 TRNAU1APQ9NX07 287 aaKnown RBP21.28■■□□□ 1
VSX1-205ENST00000429762 PCDHGA7Q9Y5G6 932 aa21.28■■□□□ 1
VSX1-205ENST00000429762 DGKBQ9Y6T7 804 aa21.28■■□□□ 1
VSX1-205ENST00000429762 FAM234BA2RU67 622 aa21.27■■□□□ 1
VSX1-205ENST00000429762 A6NCN8 305 aa21.27■■□□□ 1
VSX1-205ENST00000429762 K7ESF4 209 aa21.27■■□□□ 1
VSX1-205ENST00000429762 CXCL12P48061 93 aa21.27■■□□□ 1
VSX1-205ENST00000429762 ILF3Q12906 894 aaKnown RBP eCLIP21.27■■□□□ 1
VSX1-205ENST00000429762 PGM2L1Q6PCE3 622 aa21.27■■□□□ 1
VSX1-205ENST00000429762 TSSK4Q6SA08 328 aa21.27■■□□□ 1
VSX1-205ENST00000429762 GPR156Q8NFN8 814 aa21.27■■□□□ 1
VSX1-205ENST00000429762 NECAB3Q96P71 396 aaPredicted RBP21.27■■□□□ 1
VSX1-205ENST00000429762 TSSK3Q96PN8 268 aa21.27■■□□□ 1
VSX1-205ENST00000429762 GPR27Q9NS67 375 aa21.27■■□□□ 1
VSX1-205ENST00000429762 SPHK1Q9NYA1 384 aa21.27■■□□□ 1
VSX1-205ENST00000429762 VPS29Q9UBQ0 182 aa21.27■■□□□ 1
VSX1-205ENST00000429762 NDUFAF1Q9Y375 327 aa21.27■■□□□ 1
VSX1-205ENST00000429762 ABCA7Q8IZY2 2146 aa21.27■■□□□ 1
VSX1-205ENST00000429762 USP34Q70CQ2 3546 aa21.27■■□□□ 1
VSX1-205ENST00000429762 SERTM1A2A2V5 107 aa21.27■□□□□ 0.99
VSX1-205ENST00000429762 CCDC154A6NI56 674 aa21.27■□□□□ 0.99
VSX1-205ENST00000429762 ZNF839A8K0R7 811 aa21.27■□□□□ 0.99
VSX1-205ENST00000429762 H7BY64 318 aa21.27■□□□□ 0.99
VSX1-205ENST00000429762 SAP18O00422 153 aaKnown RBP21.27■□□□□ 0.99
VSX1-205ENST00000429762 TOR1BO14657 336 aa21.27■□□□□ 0.99
VSX1-205ENST00000429762 CIB2O75838 187 aa21.27■□□□□ 0.99
VSX1-205ENST00000429762 PRPH2P23942 346 aa21.27■□□□□ 0.99
VSX1-205ENST00000429762 MSX2P35548 267 aaPredicted RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms