RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 PAPD5Q8NDF8 572 aaKnown RBP16.26■□□□□ 0.19
SIPA1-201ENST00000394224 PSKH2Q96QS6 385 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 BTBD3Q9Y2F9 522 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 PIKFYVEQ9Y2I7 2098 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 STX16O14662 325 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 IGFBP1P08833 259 aaPredicted RBP16.26■□□□□ 0.19
SIPA1-201ENST00000394224 GJA8P48165 433 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 FCGRTP55899 365 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 SPIBQ01892 262 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 CAMK2GQ13555 558 aaPredicted RBP16.26■□□□□ 0.19
SIPA1-201ENST00000394224 ZNF683Q8IZ20 524 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 SCAMP4Q969E2 229 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 C1orf74Q96LT6 269 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 NEDD4LQ96PU5 975 aa16.26■□□□□ 0.19
SIPA1-201ENST00000394224 TRIT1Q9H3H1 467 aaKnown RBP16.26■□□□□ 0.19
SIPA1-201ENST00000394224 IQCA1LA6NCM1 817 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 HAS3O00219 553 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 STATHP02808 62 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 ZNF404Q494X3 552 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 OLIG3Q7RTU3 272 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 LILRA3Q8N6C8 439 aaPredicted RBP16.25■□□□□ 0.19
SIPA1-201ENST00000394224 TRPV1Q8NER1 839 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 CITED4Q96RK1 184 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 TCF25Q9BQ70 676 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 IL26Q9NPH9 171 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 PLSCR3Q9NRY6 295 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 SPASTQ9UBP0 616 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 DUSP12Q9UNI6 340 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 RNF6Q9Y252 685 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 LOC110117498-PIK3R3F6TDL0 507 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 GFRA2O00451 464 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 HOXD8P13378 290 aaPredicted RBP16.25■□□□□ 0.19
SIPA1-201ENST00000394224 CYP4F8P98187 520 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 CHIT1Q13231 466 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 CACUL1Q86Y37 369 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 LRRC49Q8IUZ0 686 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 APCDD1Q8J025 514 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 MFSD4AQ8N468 514 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 CELF5Q8N6W0 485 aaKnown RBP16.25■□□□□ 0.19
SIPA1-201ENST00000394224 KCNJ9Q92806 393 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 PPP1R14BQ96C90 147 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 OR5M11Q96RB7 305 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 PKMYT1Q99640 499 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 ADPRHL2Q9NX46 363 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 ERVK-11Q9UQG0 969 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 NEUROG3Q9Y4Z2 214 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 TTC34A8MYJ7 566 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 CLDN9O95484 217 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 PTHP01270 115 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 KRT6AP02538 564 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 KRT6BP04259 564 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 HIST1H2AGP0C0S8 130 aaPredicted RBP16.25■□□□□ 0.19
SIPA1-201ENST00000394224 SDC1P18827 310 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 HIST1H2ADP20671 130 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 SOX3P41225 446 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 HNF4AP41235 474 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 CTSKP43235 329 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 KRT6CP48668 564 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 ARF5P84085 180 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 EIF4EBP2Q13542 120 aaPredicted RBP16.25■□□□□ 0.19
SIPA1-201ENST00000394224 TUBA3CQ13748 450 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 FAM110CQ1W6H9 321 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 ARMCX4Q5H9R4 360 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 RTN4RL1Q86UN2 441 aaPredicted RBP16.25■□□□□ 0.19
SIPA1-201ENST00000394224 STK40Q8N2I9 435 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 HIST1H2AHQ96KK5 128 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 TRIB3Q96RU7 358 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 HIST1H2AJQ99878 128 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 H2AFJQ9BTM1 129 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 CD244Q9BZW8 370 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 MMP28Q9H239 520 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 SNTG1Q9NSN8 517 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 GABRQQ9UN88 632 aa16.25■□□□□ 0.19
SIPA1-201ENST00000394224 SLC22A1O15245 554 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 COCHO43405 550 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 TSC22D2O75157 780 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 EPN2O95208 641 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 TGM1P22735 817 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 SMAD3P84022 425 aaKnown RBP16.24■□□□□ 0.19
SIPA1-201ENST00000394224 NPRL3Q12980 569 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 NXNL2Q5VZ03 156 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 ZBTB2Q8N680 514 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 OTULINQ96BN8 352 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 DHRS7Q9Y394 339 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 SLC35F4A4IF30 521 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 SCELO95171 688 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 CSKP41240 450 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 PTGER3P43115 390 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 ZNF157P51786 506 aaPredicted RBP16.24■□□□□ 0.19
SIPA1-201ENST00000394224 IRF8Q02556 426 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 ST3GAL4Q11206 333 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 TSTQ16762 297 aaKnown RBP16.24■□□□□ 0.19
SIPA1-201ENST00000394224 XKR6Q5GH73 641 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 CYP2U1Q7Z449 544 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 SLC5A8Q8N695 610 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 TEX26Q8N6G2 289 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 CCM2Q9BSQ5 444 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 HEBP1Q9NRV9 189 aa16.24■□□□□ 0.19
SIPA1-201ENST00000394224 KIAA1522Q9P206 1035 aaPredicted RBP16.24■□□□□ 0.19
SIPA1-201ENST00000394224 ZNF639Q9UID6 485 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms