RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 HIST1H2ADP20671 130 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 EFNA1P20827 205 aaPredicted RBP17.43■□□□□ 0.38
PHF1-201ENST00000374512 FMO3P31513 532 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 KDELR2P33947 212 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 CDKN2CP42773 168 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 VEZF1Q14119 521 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 GBX1Q14549 363 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 HIST2H2ACQ16777 129 aaPredicted RBP17.43■□□□□ 0.38
PHF1-201ENST00000374512 CEP68Q76N32 757 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 EIF3MQ7L2H7 374 aaKnown RBP17.43■□□□□ 0.38
PHF1-201ENST00000374512 ZNF540Q8NDQ6 660 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 ZFP90Q8TF47 636 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 FCGR1BQ92637 280 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 HIST1H2AHQ96KK5 128 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 HIST1H2AJQ99878 128 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 H2AFJQ9BTM1 129 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 ACOT13Q9NPJ3 140 aa17.43■□□□□ 0.38
PHF1-201ENST00000374512 PIKFYVEQ9Y2I7 2098 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 PABPN1LA6NDY0 278 aaKnown RBP17.42■□□□□ 0.38
PHF1-201ENST00000374512 CLIC1O00299 241 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 GFRA2O00451 464 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 SLC16A5O15375 505 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 ADAM23O75077 832 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 KCNK5O95279 499 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 AMD1P17707 334 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 SLC6A12P48065 614 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 RXRGP48443 463 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 C21orf58P58505 322 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 ZCCHC8Q6NZY4 707 aaKnown RBP17.42■□□□□ 0.38
PHF1-201ENST00000374512 NEK5Q6P3R8 708 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 CBLL1Q75N03 491 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 ANKRD46Q86W74 232 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 PAF1Q8N7H5 531 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 STARD8Q92502 1023 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 ARMC7Q9H6L4 198 aa17.42■□□□□ 0.38
PHF1-201ENST00000374512 FAM120CQ9NX05 1096 aaKnown RBP17.42■□□□□ 0.38
PHF1-201ENST00000374512 MYO1GB0I1T2 1018 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 K7ERQ8 282 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 EPN2O95208 641 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 PARNO95453 639 aaKnown RBP17.41■□□□□ 0.38
PHF1-201ENST00000374512 TACR1P25103 407 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 CCL23P55773 120 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 ITGA1P56199 1179 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 TUBA1BP68363 451 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 SP140Q13342 867 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 INAQ16352 499 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 NOXRED1Q6NXP6 359 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 FAHD1Q6P587 224 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 MBOAT1Q6ZNC8 495 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 UBE2R2Q712K3 238 aaPredicted RBP17.41■□□□□ 0.38
PHF1-201ENST00000374512 TUBA1AQ71U36 451 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 ZNF551Q7Z340 670 aaPredicted RBP17.41■□□□□ 0.38
PHF1-201ENST00000374512 ZZZ3Q8IYH5 903 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 OR6K2Q8NGY2 324 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 NDNFQ8TB73 568 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 WFDC5Q8TCV5 224 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 METTL2AQ96IZ6 378 aaKnown RBP17.41■□□□□ 0.38
PHF1-201ENST00000374512 COPS8Q99627 209 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 CEP44Q9C0F1 390 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 REEP1Q9H902 201 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 KRT84Q9NSB2 600 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 GPRC5BQ9NZH0 403 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 PDP1Q9P0J1 537 aaPredicted RBP17.41■□□□□ 0.38
PHF1-201ENST00000374512 KIF17Q9P2E2 1029 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 E9PQ18 207 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 NUAK1O60285 661 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 FAM20BO75063 409 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 MT-ND2P03891 347 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 SOD2P04179 222 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 OR56A5P0C7T3 313 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 MPC1LP0DKB6 136 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 PSMB9P28065 219 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 MAP2K4P45985 399 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 AGAP7PQ5VUJ5 663 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 FRG2Q64ET8 278 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 NCCRP1Q6ZVX7 275 aaPredicted RBP17.41■□□□□ 0.38
PHF1-201ENST00000374512 BTLAQ7Z6A9 289 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 DNAJB7Q7Z6W7 309 aaPredicted RBP17.41■□□□□ 0.38
PHF1-201ENST00000374512 ADGRG2Q8IZP9 1017 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 OR8J2Q8NGG1 315 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 ZNF296Q8WUU4 475 aaPredicted RBP17.41■□□□□ 0.38
PHF1-201ENST00000374512 FRG2BQ96QU4 278 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 PANX1Q96RD7 426 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 SIGLEC11Q96RL6 698 aa17.41■□□□□ 0.38
PHF1-201ENST00000374512 SAMHD1Q9Y3Z3 626 aaKnown RBP17.41■□□□□ 0.38
PHF1-201ENST00000374512 FPGTO14772 594 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 UGDHO60701 494 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 IGSF6O95976 241 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 ENGP17813 658 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 TGM1P22735 817 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 SERPINA4P29622 427 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 HOXA9P31269 272 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 MASP1P48740 699 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 AP1S2P56377 157 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 CSTF3Q12996 717 aaKnown RBP17.4■□□□□ 0.38
PHF1-201ENST00000374512 PAGE2BQ5JRK9 111 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 UBE2UQ5VVX9 321 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 ZDHHC20Q5W0Z9 365 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 OR4F3Q6IEY1 312 aa17.4■□□□□ 0.38
PHF1-201ENST00000374512 GPR155Q7Z3F1 870 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms