RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 SLC25A51Q9H1U9 297 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 B3GALT2O43825 422 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 TOXO94900 526 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 DAG1Q14118 895 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 HERC3Q15034 1050 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 HAGHLQ6PII5 290 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 PAQR7Q86WK9 346 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 STOML3Q8TAV4 291 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 AGLP35573 1532 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 COL5A2P05997 1499 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 DEPDC5O75140 1603 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 UPK3BL1B0FP48 263 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 UPK3BL2E5RIL1 263 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 ECI2O75521 394 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 RENP00797 406 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 CHRM1P11229 460 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 KHKP50053 298 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 SLBPQ14493 270 aaKnown RBP eCLIP16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 BATFQ16520 125 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 SYPL2Q5VXT5 272 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 GPC2Q8N158 579 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 HDDC3Q8N4P3 179 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 CPA6Q8N4T0 437 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 SAV1Q9H4B6 383 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 GLOD5A6NK44 160 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 WASH3PC4AMC7 463 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 MAFKO60675 156 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 GXYLT1Q4G148 440 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 ARSIQ5FYB1 569 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 NUP54Q7Z3B4 507 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 SLC38A3Q99624 504 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 SPATA9Q9BWV2 254 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 DHX33Q9H6R0 707 aaKnown RBP16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 PAK6Q9NQU5 681 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 KAT6AQ92794 2004 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 CDC7O00311 574 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 TLX2O43763 284 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 GLUD2P49448 558 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 FXYD6P3P58550 94 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 RIN1Q13671 783 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 GDF6Q6KF10 455 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 METTL27Q8N6F8 245 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 COPS7AQ9UBW8 275 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 SLC22A14Q9Y267 594 aa16.41■□□□□ 0.22
TSPAN3-201ENST00000267970 ISPDA4D126 451 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 NDUFS4O43181 175 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 CKMT1AP12532 417 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 PRDX6P30041 224 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 NDUFA9Q16795 377 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 OR5T2Q8NGG2 359 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 SMURF1Q9HCE7 757 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 HSPB11Q9Y547 144 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 ERCC6L2Q5T890 1561 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 HYKKA2RU49 373 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 HLA-DQB2P05538 268 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 ACP5P13686 325 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 SLC9A3P48764 834 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 CBLBQ13191 982 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 KLHL22Q53GT1 634 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 FTHL17Q9BXU8 183 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 A0A0J9YVX5 310 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 TVP23AA6NH52 213 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 BLOC1S5-TXNDC5H3BN57 136 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 CLIC1O00299 241 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 ABLIM1O14639 778 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 ADAMTS3O15072 1205 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 VILLO15195 856 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 NFE2L1Q14494 772 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 SYVN1Q86TM6 617 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 MND1Q9BWT6 205 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 NUDT15Q9NV35 164 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 LYARQ9NX58 379 aaKnown RBP16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 GALPQ9UBC7 116 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 LGALS13Q9UHV8 139 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 ALPPL2P10696 532 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 IL1R2P27930 398 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 RPS24P62847 133 aaKnown RBP16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 ZDHHC24Q6UX98 284 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 GKN1Q9NS71 199 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 CYTH4Q9UIA0 394 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 B4DGG1 531 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 E2F3O00716 465 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 NR4A2P43354 598 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 NKX2-5P52952 324 aaPredicted RBP16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 ERVK-21P61565 698 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 GPALPP1Q8IXQ4 340 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 ZNF557Q8N988 423 aaPredicted RBP16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 MIPEPQ99797 713 aa16.4■□□□□ 0.22
TSPAN3-201ENST00000267970 PDCD5O14737 125 aa16.39■□□□□ 0.22
TSPAN3-201ENST00000267970 CYB5AP00167 134 aa16.39■□□□□ 0.22
TSPAN3-201ENST00000267970 RABL3Q5HYI8 236 aa16.39■□□□□ 0.22
TSPAN3-201ENST00000267970 MUC13Q9H3R2 512 aa16.39■□□□□ 0.22
TSPAN3-201ENST00000267970 ZNF705EA8MWA4 302 aaPredicted RBP16.39■□□□□ 0.21
TSPAN3-201ENST00000267970 RPS3P23396 243 aaKnown RBP eCLIP16.39■□□□□ 0.213e-7■■■□□ 18.1
TSPAN3-201ENST00000267970 PON2Q15165 354 aa16.39■□□□□ 0.21
TSPAN3-201ENST00000267970 OVCA2Q8WZ82 227 aa16.39■□□□□ 0.21
TSPAN3-201ENST00000267970 ITPAQ9BY32 194 aa16.39■□□□□ 0.21
TSPAN3-201ENST00000267970 MCCC2Q9HCC0 563 aa16.39■□□□□ 0.21
TSPAN3-201ENST00000267970 ZCCHC3Q9NUD5 404 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms