RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SPAG1Q07617 926 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 EP300Q09472 2414 aaPredicted RBP3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 DLG1Q12959 904 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 PLD1Q13393 1074 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 NAE1Q13564 534 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 FGFBP1Q14512 234 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 TMEM132DQ14C87 1099 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 SF3B4Q15427 424 aaKnown RBP eCLIP3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 IZUMO4Q1ZYL8 232 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 KLHL22Q53GT1 634 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 SETMARQ53H47 684 aaPredicted RBP3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 HIST2H2BCQ6DN03 193 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 HIST2H2BDQ6DRA6 164 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 CENPPQ6IPU0 288 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 PLEKHA7Q6IQ23 1121 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 CDC73Q6P1J9 531 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 DSTYKQ6XUX3 929 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 QSOX2Q6ZRP7 698 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 GVINP1Q7Z2Y8 2422 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 C12orf56Q8IXR9 622 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 EFCAB13Q8IY85 973 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 GPD1LQ8N335 351 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 LRRC52Q8N7C0 313 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 PDILTQ8N807 584 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 LILRB1Q8NHL6 650 aaPredicted RBP3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 METTL6Q8TCB7 284 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 SPPL2BQ8TCT7 592 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 C2orf15Q8WU43 125 aaKnown RBP3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 POMGNT1Q8WZA1 660 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 RND1Q92730 232 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 FGF13Q92913 245 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 FGF14Q92915 247 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 ELSPBP1Q96BH3 223 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 MTBPQ96DY7 904 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 SLC41A2Q96JW4 573 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 SENP8Q96LD8 212 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF560Q96MR9 790 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 DUX5Q96PT3 197 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 FAM110AQ9BQ89 295 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 KXD1Q9BQD3 176 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 RTP3Q9BQQ7 232 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZFHX2Q9C0A1 2572 aaPredicted RBP3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 GPR88Q9GZN0 384 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 PDCL3Q9H2J4 239 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZHX3Q9H4I2 956 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 GAREM1Q9H706 876 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 WDR26Q9H7D7 661 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 DDX31Q9H8H2 851 aaKnown RBP3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 TRPV4Q9HBA0 871 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 NOX4Q9NPH5 578 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 TRPV5Q9NQA5 729 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 ASAH2Q9NR71 780 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 SLC6A13Q9NSD5 602 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 GDAP2Q9NXN4 497 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 DPP3Q9NY33 737 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 PCDHGB1Q9Y5G3 927 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 ATP6V1DQ9Y5K8 247 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 CEPT1Q9Y6K0 416 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 CAPN7Q9Y6W3 813 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 MTMR11A4FU01 709 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 EME2A4GXA9 379 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 NPIPB15A6NHN6 443 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF233A6NK53 670 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 KPNA7A9QM74 516 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 SOCS6O14544 535 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 CYB561D2O14569 222 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 PRRG1O14668 218 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 CCL16O15467 120 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 KLRC4O43908 158 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 SEC14L2O76054 403 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 RTN3O95197 1032 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 CLDN14O95500 239 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 FGF19O95750 216 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 PDGFBP01127 241 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 SRCP12931 536 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 MAOAP21397 527 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 SP100P23497 879 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 TUFMP49411 452 aaKnown RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 VCPP55072 806 aaKnown RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 RPL7AP62424 266 aaKnown RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ASIC1P78348 528 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 NTHL1P78549 312 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 RBP5P82980 135 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ENPEPQ07075 957 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 DRAP1Q14919 205 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 PSMD6Q15008 389 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ALG11Q2TAA5 492 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 COL28A1Q2UY09 1125 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 SLC45A4Q5BKX6 768 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 PAPPA-AS1Q5QFB9 102 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 CYP4A22Q5TCH4 519 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ARMCX5Q6P1M9 558 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 METTL2BQ6P1Q9 378 aaKnown RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 SPSB3Q6PJ21 355 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 GET4Q7L5D6 327 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 TAOK1Q7L7X3 1001 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 HAPLN4Q86UW8 402 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 WDR49Q8IV35 697 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 FOXRED2Q8IWF2 684 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 DCP1BQ8IZD4 617 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms